Analysis of interatomic Contacts of Structural Units in PDB entry:
3F6X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3F6X entry

There are 4 chains in PDB entry 3F6X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 255LEU 533
B
 LEU 255LEU 533
C
 LEU 255LEU 533
D
 LYS 257LEU 533
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 58 helices in PDB entry 3F6X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
263 265Right-handed 310
Helix 2
2
A
303 308Right-handed alpha
Helix 3
3
A
308 317Right-handed alpha
Helix 4
4
A
346 352Right-handed alpha
Helix 5
5
A
354 358Right-handed 310
Helix 6
6
A
359 380Right-handed alpha
Helix 7
7
A
388 390Right-handed 310
Helix 8
8
A
396 398Right-handed 310
Helix 9
9
A
425 429Right-handed 310
Helix 10
10
A
430 437Right-handed alpha
Helix 11
11
A
440 457Right-handed alpha
Helix 12
12
A
467 477Right-handed alpha
Helix 13
13
A
488 499Right-handed alpha
Helix 14
14
A
502 506Right-handed 310
Helix 15
15
A
508 523Right-handed alpha
Helix 16
16
B
263 265Right-handed 310
Helix 17
17
B
303 308Right-handed alpha
Helix 18
18
B
308 316Right-handed alpha
Helix 19
19
B
346 352Right-handed alpha
Helix 20
20
B
359 380Right-handed alpha
Helix 21
21
B
388 390Right-handed 310
Helix 22
22
B
396 398Right-handed 310
Helix 23
23
B
425 429Right-handed 310
Helix 24
24
B
430 437Right-handed alpha
Helix 25
25
B
440 457Right-handed alpha
Helix 26
26
B
467 477Right-handed alpha
Helix 27
27
B
488 499Right-handed alpha
Helix 28
28
B
502 506Right-handed 310
Helix 29
29
B
508 523Right-handed alpha
Helix 30
30
C
263 265Right-handed 310
Helix 31
31
C
304 307Right-handed 310
Helix 32
32
C
308 315Right-handed alpha
Helix 33
33
C
346 352Right-handed alpha
Helix 34
34
C
354 358Right-handed 310
Helix 35
35
C
359 380Right-handed alpha
Helix 36
36
C
388 390Right-handed 310
Helix 37
37
C
396 398Right-handed 310
Helix 38
38
C
430 437Right-handed alpha
Helix 39
39
C
440 457Right-handed alpha
Helix 40
40
C
467 477Right-handed alpha
Helix 41
41
C
488 499Right-handed alpha
Helix 42
42
C
502 506Right-handed 310
Helix 43
43
C
508 518Right-handed alpha
Helix 44
44
C
518 523Right-handed alpha
Helix 45
45
D
263 265Right-handed 310
Helix 46
46
D
303 317Right-handed alpha
Helix 47
47
D
345 352Right-handed alpha
Helix 48
48
D
353 356Right-handed 310
Helix 49
49
D
359 380Right-handed alpha
Helix 50
50
D
388 390Right-handed 310
Helix 51
51
D
425 429Right-handed 310
Helix 52
52
D
430 437Right-handed alpha
Helix 53
53
D
440 457Right-handed alpha
Helix 54
54
D
467 477Right-handed alpha
Helix 55
55
D
488 499Right-handed alpha
Helix 56
56
D
502 506Right-handed 310
Helix 57
57
D
508 518Right-handed alpha
Helix 58
58
D
518 523Right-handed alpha
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There are 11 sheets in PDB entry 3F6X. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
267 274first strand
Strand 2
A
281 286anti-parallel
Strand 3
A
290 294anti-parallel
Strand 4
A
335 338anti-parallel
Strand 5
A
325 329anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
344 345first strand
Strand 2
A
392 394anti-parallel
Strand 3
A
400 402anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
382 383first strand
Strand 2
A
409 410anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
267 274first strand
Strand 2
B
281 286anti-parallel
Strand 3
B
290 296anti-parallel
Strand 4
B
335 339anti-parallel
Strand 5
B
325 329anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
344 345first strand
Strand 2
B
392 394anti-parallel
Strand 3
B
400 402anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
382 383first strand
Strand 2
B
409 410anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
267 275first strand
Strand 2
C
280 286anti-parallel
Strand 3
C
290 296anti-parallel
Strand 4
C
335 338anti-parallel
Strand 5
C
325 329anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
344 345first strand
Strand 2
C
392 394anti-parallel
Strand 3
C
400 402anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
382 383first strand
Strand 2
C
409 410anti-parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
267 274first strand
Strand 2
D
281 286anti-parallel
Strand 3
D
290 297anti-parallel
Strand 4
D
334 338anti-parallel
Strand 5
D
325 329anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
392 394first strand
Strand 2
D
400 402anti-parallel
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