Analysis of interatomic Contacts of Structural Units in PDB entry:
3F7Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3F7Q entry

There are 2 chains in PDB entry 3F7Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 1126SER 1339
B
 ASP 1126SER 1339
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 3F7Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1167 1171Right-handed 310
Helix 2
2
A
1315 1319Right-handed 310
Helix 3
3
B
1167 1171Right-handed 310
Helix 4
4
B
1315 1319Right-handed 310
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There are 12 sheets in PDB entry 3F7Q. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1131 1137first strand
Strand 2
A
1143 1148anti-parallel
Strand 3
A
1180 1183anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1172 1176first strand
Strand 2
A
1156 1163anti-parallel
Strand 3
A
1191 1200anti-parallel
Strand 4
A
1203 1204anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1172 1176first strand
Strand 2
A
1156 1163anti-parallel
Strand 3
A
1191 1200anti-parallel
Strand 4
A
1211 1214anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1227 1230first strand
Strand 2
A
1236 1239anti-parallel
Strand 3
A
1282 1286anti-parallel
Strand 4
A
1334 1336parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1271 1272first strand
Strand 2
A
1252 1259anti-parallel
Strand 3
A
1294 1302anti-parallel
Strand 4
A
1305 1306anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1271 1272first strand
Strand 2
A
1252 1259anti-parallel
Strand 3
A
1294 1302anti-parallel
Strand 4
A
1310 1314anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1131 1137first strand
Strand 2
B
1143 1148anti-parallel
Strand 3
B
1180 1183anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1172 1176first strand
Strand 2
B
1156 1163anti-parallel
Strand 3
B
1191 1200anti-parallel
Strand 4
B
1203 1204anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1172 1176first strand
Strand 2
B
1156 1163anti-parallel
Strand 3
B
1191 1200anti-parallel
Strand 4
B
1211 1214anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1227 1232first strand
Strand 2
B
1235 1239anti-parallel
Strand 3
B
1282 1286anti-parallel
Strand 4
B
1334 1336parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1271 1272first strand
Strand 2
B
1252 1259anti-parallel
Strand 3
B
1294 1302anti-parallel
Strand 4
B
1305 1306anti-parallel
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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1271 1272first strand
Strand 2
B
1252 1259anti-parallel
Strand 3
B
1294 1302anti-parallel
Strand 4
B
1310 1314anti-parallel
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