Analysis of interatomic Contacts of Structural Units in PDB entry:
3F95


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3F95 entry

There are 2 chains in PDB entry 3F95 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 632LYS 813
B
 SER 634LYS 813
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 3F95. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
708 712Right-handed 310
Helix 2
2
A
750 755Right-handed alpha
Helix 3
3
B
708 712Right-handed 310
Helix 4
4
B
750 755Right-handed alpha
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There are 6 sheets in PDB entry 3F95. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
634 638first strand
Strand 2
A
789 799anti-parallel
Strand 3
A
686 691anti-parallel
Strand 4
A
673 678anti-parallel
Strand 5
A
665 666anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
634 638first strand
Strand 2
A
789 799anti-parallel
Strand 3
A
715 724anti-parallel
Strand 4
A
760 765anti-parallel
Strand 5
A
807 808parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
657 660first strand
Strand 2
A
646 652anti-parallel
Strand 3
A
695 706anti-parallel
Strand 4
A
777 786anti-parallel
Strand 5
A
730 736anti-parallel
Strand 6
A
741 746anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
635 638first strand
Strand 2
B
789 799anti-parallel
Strand 3
B
686 691anti-parallel
Strand 4
B
673 678anti-parallel
Strand 5
B
665 666anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
635 638first strand
Strand 2
B
789 799anti-parallel
Strand 3
B
715 724anti-parallel
Strand 4
B
760 765anti-parallel
Strand 5
B
807 808parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
657 660first strand
Strand 2
B
646 652anti-parallel
Strand 3
B
695 706anti-parallel
Strand 4
B
777 786anti-parallel
Strand 5
B
730 736anti-parallel
Strand 6
B
741 746anti-parallel
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