Analysis of interatomic Contacts of Structural Units in PDB entry:
3FBS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3FBS entry

There are 2 chains in PDB entry 3FBS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PRO 294
B
 MET 1GLU 295
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 3FBS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 24Right-handed alpha
Helix 2
2
A
36 41Right-handed 310
Helix 3
3
A
54 67Right-handed alpha
Helix 4
4
A
120 124Right-handed 310
Helix 5
5
A
131 136Right-handed alpha
Helix 6
6
A
137 140Right-handed 310
Helix 7
7
A
152 160Right-handed alpha
Helix 8
8
A
161 163Right-handed 310
Helix 9
9
A
177 187Right-handed alpha
Helix 10
10
A
230 235Right-handed alpha
Helix 11
11
A
264 268Right-handed 310
Helix 12
12
A
272 293Right-handed alpha
Helix 13
13
B
11 24Right-handed alpha
Helix 14
14
B
54 67Right-handed alpha
Helix 15
15
B
120 124Right-handed 310
Helix 16
16
B
131 136Right-handed alpha
Helix 17
17
B
137 140Right-handed 310
Helix 18
18
B
152 160Right-handed alpha
Helix 19
19
B
177 188Right-handed alpha
Helix 20
20
B
230 235Right-handed alpha
Helix 21
21
B
264 268Right-handed 310
Helix 22
22
B
272 293Right-handed alpha
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There are 11 sheets in PDB entry 3FBS. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 76first strand
Strand 2
A
28 32parallel
Strand 3
A
3 8parallel
Strand 4
A
98 106parallel
Strand 5
A
88 93anti-parallel
Strand 6
A
79 85anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 76first strand
Strand 2
A
28 32parallel
Strand 3
A
3 8parallel
Strand 4
A
98 106parallel
Strand 5
A
260 262parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 113first strand
Strand 2
A
223 225anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
128 129first strand
Strand 2
A
217 220parallel
Strand 3
A
143 147parallel
Strand 4
A
165 169parallel
Strand 5
A
190 192parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
196 200first strand
Strand 2
A
203 207anti-parallel
Strand 3
A
212 215anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
244 247first strand
Strand 2
A
238 241anti-parallel
Strand 3
B
238 241anti-parallel
Strand 4
B
244 247anti-parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
72 76first strand
Strand 2
B
28 32parallel
Strand 3
B
3 8parallel
Strand 4
B
97 106parallel
Strand 5
B
88 93anti-parallel
Strand 6
B
79 85anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
72 76first strand
Strand 2
B
28 32parallel
Strand 3
B
3 8parallel
Strand 4
B
97 106parallel
Strand 5
B
260 262parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
111 113first strand
Strand 2
B
223 225anti-parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
128 129first strand
Strand 2
B
217 220parallel
Strand 3
B
141 147parallel
Strand 4
B
164 169parallel
Strand 5
B
190 192parallel
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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
196 200first strand
Strand 2
B
204 207anti-parallel
Strand 3
B
212 213anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il