Analysis of interatomic Contacts of Structural Units in PDB entry:
3FC3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3FC3 entry

There are 4 chains in PDB entry 3FC3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 189
B
 LEU 2GLU 189
C
 DC -4 DA 4
D
 DT -4 DG 4
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 12 helices in PDB entry 3FC3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
55 59Right-handed 310
Helix 2
2
A
78 80Right-handed 310
Helix 3
3
A
97 106Right-handed alpha
Helix 4
4
A
110 120Right-handed alpha
Helix 5
5
A
162 171Right-handed alpha
Helix 6
6
A
174 188Right-handed alpha
Helix 7
7
B
55 59Right-handed 310
Helix 8
8
B
78 80Right-handed 310
Helix 9
9
B
97 106Right-handed alpha
Helix 10
10
B
110 119Right-handed alpha
Helix 11
11
B
162 171Right-handed alpha
Helix 12
12
B
174 188Right-handed alpha
Back to top of page

There are 10 sheets in PDB entry 3FC3. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 47first strand
Strand 2
A
32 37anti-parallel
Strand 3
A
22 29anti-parallel
Strand 4
A
7 10anti-parallel
Strand 5
A
51 53anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 67first strand
Strand 2
A
74 76anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
82 85first strand
Strand 2
A
91 93anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
127 129first strand
Strand 2
A
136 138anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
145 149first strand
Strand 2
A
156 161anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
42 47first strand
Strand 2
B
32 37anti-parallel
Strand 3
B
22 28anti-parallel
Strand 4
B
7 10anti-parallel
Strand 5
B
51 53anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
65 67first strand
Strand 2
B
74 76anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
82 85first strand
Strand 2
B
91 93anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
127 129first strand
Strand 2
B
136 138anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
145 149first strand
Strand 2
B
156 161anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il