Analysis of interatomic Contacts of Structural Units in PDB entry:
3FCP

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3FCP entry

There are 8 chains in PDB entry 3FCP (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 3	GLN 373
B	ALA 5	GLN 373
C	ALA 5	GLN 373
D	ALA 5	GLN 373
E	THR 4	GLN 373
F	ALA 5	GLN 373
G	ALA 5	GLN 373
H	LEU 3	GLN 373

There are121 helices in PDB entry 3FCP. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	64	75	Right-handed alpha
Helix 2	2	A	75	81	Right-handed alpha
Helix 3	3	A	87	99	Right-handed alpha
Helix 4	4	A	102	122	Right-handed alpha
Helix 5	5	A	124	129	Right-handed alpha
Helix 6	6	A	147	159	Right-handed alpha
Helix 7	7	A	175	190	Right-handed alpha
Helix 8	8	A	205	219	Right-handed alpha
Helix 9	9	A	232	243	Right-handed alpha
Helix 10	10	A	255	265	Right-handed alpha
Helix 11	11	A	274	279	Right-handed alpha
Helix 12	12	A	282	295	Right-handed alpha
Helix 13	13	A	306	318	Right-handed alpha
Helix 14	14	A	329	334	Right-handed 310
Helix 15	15	A	363	371	Right-handed alpha
Helix 16	16	B	64	75	Right-handed alpha
Helix 17	17	B	75	81	Right-handed alpha
Helix 18	18	B	87	99	Right-handed alpha
Helix 19	19	B	102	122	Right-handed alpha
Helix 20	20	B	124	129	Right-handed alpha
Helix 21	21	B	147	160	Right-handed alpha
Helix 22	22	B	175	191	Right-handed alpha
Helix 23	23	B	205	220	Right-handed alpha
Helix 24	24	B	232	243	Right-handed alpha
Helix 25	25	B	255	265	Right-handed alpha
Helix 26	26	B	274	279	Right-handed alpha
Helix 27	27	B	282	295	Right-handed alpha
Helix 28	28	B	306	318	Right-handed alpha
Helix 29	29	B	329	334	Right-handed 310
Helix 30	30	B	363	371	Right-handed alpha
Helix 31	31	C	64	75	Right-handed alpha
Helix 32	32	C	75	81	Right-handed alpha
Helix 33	33	C	87	99	Right-handed alpha
Helix 34	34	C	102	122	Right-handed alpha
Helix 35	35	C	124	129	Right-handed alpha
Helix 36	36	C	147	159	Right-handed alpha
Helix 37	37	C	175	191	Right-handed alpha
Helix 38	38	C	205	219	Right-handed alpha
Helix 39	39	C	232	243	Right-handed alpha
Helix 40	40	C	255	265	Right-handed alpha
Helix 41	41	C	274	279	Right-handed alpha
Helix 42	42	C	283	294	Right-handed alpha
Helix 43	43	C	306	318	Right-handed alpha
Helix 44	44	C	329	334	Right-handed 310
Helix 45	45	C	363	371	Right-handed alpha
Helix 46	46	D	64	75	Right-handed alpha
Helix 47	47	D	75	81	Right-handed alpha
Helix 48	48	D	87	99	Right-handed alpha
Helix 49	49	D	102	122	Right-handed alpha
Helix 50	50	D	124	129	Right-handed alpha
Helix 51	51	D	147	159	Right-handed alpha
Helix 52	52	D	175	191	Right-handed alpha
Helix 53	53	D	205	219	Right-handed alpha
Helix 54	54	D	232	243	Right-handed alpha
Helix 55	55	D	255	266	Right-handed alpha
Helix 56	56	D	274	279	Right-handed alpha
Helix 57	57	D	282	294	Right-handed alpha
Helix 58	58	D	306	318	Right-handed alpha
Helix 59	59	D	329	334	Right-handed 310
Helix 60	60	D	363	371	Right-handed alpha
Helix 61	61	E	64	75	Right-handed alpha
Helix 62	62	E	75	81	Right-handed alpha
Helix 63	63	E	87	99	Right-handed alpha
Helix 64	64	E	102	122	Right-handed alpha
Helix 65	65	E	124	129	Right-handed alpha
Helix 66	66	E	147	159	Right-handed alpha
Helix 67	67	E	175	191	Right-handed alpha
Helix 68	68	E	205	220	Right-handed alpha
Helix 69	69	E	229	231	Right-handed 310
Helix 70	70	E	232	243	Right-handed alpha
Helix 71	71	E	255	265	Right-handed alpha
Helix 72	72	E	274	279	Right-handed alpha
Helix 73	73	E	282	294	Right-handed alpha
Helix 74	74	E	306	318	Right-handed alpha
Helix 75	75	E	329	334	Right-handed 310
Helix 76	76	E	363	371	Right-handed alpha
Helix 77	77	F	64	75	Right-handed alpha
Helix 78	78	F	75	81	Right-handed alpha
Helix 79	79	F	87	99	Right-handed alpha
Helix 80	80	F	102	122	Right-handed alpha
Helix 81	81	F	124	129	Right-handed alpha
Helix 82	82	F	147	160	Right-handed alpha
Helix 83	83	F	175	191	Right-handed alpha
Helix 84	84	F	205	219	Right-handed alpha
Helix 85	85	F	232	243	Right-handed alpha
Helix 86	86	F	255	265	Right-handed alpha
Helix 87	87	F	274	279	Right-handed alpha
Helix 88	88	F	282	294	Right-handed alpha
Helix 89	89	F	306	318	Right-handed alpha
Helix 90	90	F	329	334	Right-handed 310
Helix 91	91	F	363	371	Right-handed alpha
Helix 92	92	G	64	75	Right-handed alpha
Helix 93	93	G	75	81	Right-handed alpha
Helix 94	94	G	87	99	Right-handed alpha
Helix 95	95	G	102	122	Right-handed alpha
Helix 96	96	G	124	129	Right-handed alpha
Helix 97	97	G	147	157	Right-handed alpha
Helix 98	98	G	175	190	Right-handed alpha
Helix 99	99	G	205	219	Right-handed alpha
Helix 100	100	G	232	243	Right-handed alpha
Helix 101	101	G	255	265	Right-handed alpha
Helix 102	102	G	274	279	Right-handed alpha
Helix 103	103	G	283	294	Right-handed alpha
Helix 104	104	G	306	318	Right-handed alpha
Helix 105	105	G	329	334	Right-handed 310
Helix 106	106	G	363	371	Right-handed alpha
Helix 107	107	H	64	75	Right-handed alpha
Helix 108	108	H	75	81	Right-handed alpha
Helix 109	109	H	87	99	Right-handed alpha
Helix 110	110	H	102	122	Right-handed alpha
Helix 111	111	H	124	129	Right-handed alpha
Helix 112	112	H	147	160	Right-handed alpha
Helix 113	113	H	175	191	Right-handed alpha
Helix 114	114	H	205	220	Right-handed alpha
Helix 115	115	H	232	243	Right-handed alpha
Helix 116	116	H	255	265	Right-handed alpha
Helix 117	117	H	274	279	Right-handed alpha
Helix 118	118	H	282	295	Right-handed alpha
Helix 119	119	H	306	318	Right-handed alpha
Helix 120	120	H	329	334	Right-handed 310
Helix 121	121	H	363	371	Right-handed alpha

There are 24 sheets in PDB entry 3FCP. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	7	17	first strand
Strand 2	A	33	42	anti-parallel
Strand 3	A	47	53	anti-parallel

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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	136	138	first strand
Strand 2	A	349	351	anti-parallel
Strand 3	A	345	346	anti-parallel

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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	141	143	first strand
Strand 2	A	166	170	parallel
Strand 3	A	195	199	parallel
Strand 4	A	223	225	parallel
Strand 5	A	246	249	parallel
Strand 6	A	270	273	parallel
Strand 7	A	297	300	parallel

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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	7	17	first strand
Strand 2	B	33	42	anti-parallel
Strand 3	B	47	53	anti-parallel

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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	136	138	first strand
Strand 2	B	349	351	anti-parallel
Strand 3	B	345	346	anti-parallel

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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	141	143	first strand
Strand 2	B	166	170	parallel
Strand 3	B	195	199	parallel
Strand 4	B	223	225	parallel
Strand 5	B	246	249	parallel
Strand 6	B	270	273	parallel
Strand 7	B	297	300	parallel

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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	7	17	first strand
Strand 2	C	33	42	anti-parallel
Strand 3	C	47	53	anti-parallel

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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	136	138	first strand
Strand 2	C	349	351	anti-parallel
Strand 3	C	345	346	anti-parallel

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There are 7 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	141	143	first strand
Strand 2	C	166	170	parallel
Strand 3	C	195	199	parallel
Strand 4	C	223	225	parallel
Strand 5	C	246	249	parallel
Strand 6	C	270	273	parallel
Strand 7	C	297	300	parallel

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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	7	17	first strand
Strand 2	D	33	42	anti-parallel
Strand 3	D	47	53	anti-parallel

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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	136	138	first strand
Strand 2	D	349	351	anti-parallel
Strand 3	D	345	346	anti-parallel

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There are 7 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	141	143	first strand
Strand 2	D	166	170	parallel
Strand 3	D	195	199	parallel
Strand 4	D	223	225	parallel
Strand 5	D	246	249	parallel
Strand 6	D	270	273	parallel
Strand 7	D	297	300	parallel

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There are 3 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	7	17	first strand
Strand 2	E	33	42	anti-parallel
Strand 3	E	47	53	anti-parallel

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There are 3 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	136	138	first strand
Strand 2	E	349	351	anti-parallel
Strand 3	E	345	346	anti-parallel

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There are 7 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	141	143	first strand
Strand 2	E	166	170	parallel
Strand 3	E	195	199	parallel
Strand 4	E	223	225	parallel
Strand 5	E	246	249	parallel
Strand 6	E	270	273	parallel
Strand 7	E	297	300	parallel

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There are 3 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	7	17	first strand
Strand 2	F	33	42	anti-parallel
Strand 3	F	47	53	anti-parallel

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There are 3 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	136	138	first strand
Strand 2	F	349	351	anti-parallel
Strand 3	F	345	346	anti-parallel

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There are 7 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	141	143	first strand
Strand 2	F	166	170	parallel
Strand 3	F	195	199	parallel
Strand 4	F	223	225	parallel
Strand 5	F	246	249	parallel
Strand 6	F	270	273	parallel
Strand 7	F	297	300	parallel

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There are 3 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	7	17	first strand
Strand 2	G	33	42	anti-parallel
Strand 3	G	47	53	anti-parallel

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There are 3 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	136	138	first strand
Strand 2	G	349	351	anti-parallel
Strand 3	G	345	346	anti-parallel

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There are 7 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	141	143	first strand
Strand 2	G	166	170	parallel
Strand 3	G	195	199	parallel
Strand 4	G	223	225	parallel
Strand 5	G	246	249	parallel
Strand 6	G	270	273	parallel
Strand 7	G	297	300	parallel

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There are 3 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	7	17	first strand
Strand 2	H	33	42	anti-parallel
Strand 3	H	47	53	anti-parallel

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There are 3 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	136	138	first strand
Strand 2	H	349	351	anti-parallel
Strand 3	H	345	346	anti-parallel

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There are 7 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	141	143	first strand
Strand 2	H	166	170	parallel
Strand 3	H	195	199	parallel
Strand 4	H	223	225	parallel
Strand 5	H	246	249	parallel
Strand 6	H	270	273	parallel
Strand 7	H	297	300	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3FCP

Analysis of interatomic Contacts of Structural Units in PDB entry:
3FCP