Analysis of interatomic Contacts of Structural Units in PDB entry:
3FEG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3FEG entry

There is 1 chain in PDB entry 3FEG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 42LEU 388
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 3FEG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
42 58Right-handed alpha
Helix 2
2
A
59 64Right-handed 310
Helix 3
3
A
65 69Right-handed 310
Helix 4
4
A
112 129Right-handed alpha
Helix 5
5
A
154 159Right-handed 310
Helix 6
6
A
160 176Right-handed alpha
Helix 7
7
A
186 202Right-handed alpha
Helix 8
8
A
211 216Right-handed alpha
Helix 9
9
A
217 231Right-handed alpha
Helix 10
10
A
244 246Right-handed 310
Helix 11
11
A
273 284Right-handed alpha
Helix 12
12
A
300 303Right-handed 310
Helix 13
13
A
305 321Right-handed alpha
Helix 14
14
A
327 362Right-handed alpha
Helix 15
15
A
369 387Right-handed alpha
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There are 4 sheets in PDB entry 3FEG. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 73first strand
Strand 2
A
82 86anti-parallel
Strand 3
A
100 105anti-parallel
Strand 4
A
142 146anti-parallel
Strand 5
A
135 139anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
150 152first strand
Strand 2
A
248 251anti-parallel
Strand 3
A
260 262anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
236 239first strand
Strand 2
A
269 272anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
286 287first strand
Strand 2
A
297 298anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il