Analysis of interatomic Contacts of Structural Units in PDB entry:
3FG6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3FG6 entry

There are 8 chains in PDB entry 3FG6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 396	TRP 715
C	GLY 396	SER 712
G	GLY 396	TRP 715
E	GLY 396	TRP 715
F	GLY 396	TRP 715
H	GLY 396	TRP 715
D	GLY 396	SER 712
B	GLY 396	TRP 715

There are 79 helices in PDB entry 3FG6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	412	416	Right-handed 310
Helix 2	2	A	446	464	Right-handed alpha
Helix 3	3	A	479	484	Right-handed alpha
Helix 4	4	A	531	535	Right-handed 310
Helix 5	5	A	559	573	Right-handed alpha
Helix 6	6	A	586	593	Right-handed alpha
Helix 7	7	A	636	640	Right-handed 310
Helix 8	8	A	663	675	Right-handed alpha
Helix 9	9	A	700	705	Right-handed alpha
Helix 10	21	C	412	416	Right-handed 310
Helix 11	22	C	446	464	Right-handed alpha
Helix 12	23	C	479	485	Right-handed alpha
Helix 13	24	C	531	535	Right-handed 310
Helix 14	25	C	559	573	Right-handed alpha
Helix 15	26	C	586	593	Right-handed alpha
Helix 16	27	C	636	640	Right-handed 310
Helix 17	28	C	663	680	Right-handed alpha
Helix 18	29	C	700	705	Right-handed alpha
Helix 19	59	G	412	416	Right-handed 310
Helix 20	60	G	446	464	Right-handed alpha
Helix 21	61	G	479	486	Right-handed alpha
Helix 22	62	G	531	535	Right-handed 310
Helix 23	63	G	559	573	Right-handed alpha
Helix 24	64	G	586	593	Right-handed alpha
Helix 25	65	G	608	612	Right-handed 310
Helix 26	66	G	636	640	Right-handed 310
Helix 27	67	G	663	678	Right-handed alpha
Helix 28	68	G	700	705	Right-handed alpha
Helix 29	69	G	711	715	Right-handed 310
Helix 30	39	E	412	416	Right-handed 310
Helix 31	40	E	446	464	Right-handed alpha
Helix 32	41	E	479	485	Right-handed alpha
Helix 33	42	E	531	535	Right-handed 310
Helix 34	43	E	559	573	Right-handed alpha
Helix 35	44	E	586	593	Right-handed alpha
Helix 36	45	E	636	640	Right-handed 310
Helix 37	46	E	663	673	Right-handed alpha
Helix 38	47	E	700	705	Right-handed alpha
Helix 39	48	F	412	416	Right-handed 310
Helix 40	49	F	446	464	Right-handed alpha
Helix 41	50	F	479	485	Right-handed alpha
Helix 42	51	F	531	535	Right-handed 310
Helix 43	52	F	559	573	Right-handed alpha
Helix 44	53	F	586	593	Right-handed alpha
Helix 45	54	F	602	606	Right-handed 310
Helix 46	55	F	636	640	Right-handed 310
Helix 47	56	F	663	680	Right-handed alpha
Helix 48	57	F	700	705	Right-handed alpha
Helix 49	58	F	711	715	Right-handed 310
Helix 50	70	H	412	416	Right-handed 310
Helix 51	71	H	446	464	Right-handed alpha
Helix 52	72	H	479	484	Right-handed alpha
Helix 53	73	H	531	535	Right-handed 310
Helix 54	74	H	559	573	Right-handed alpha
Helix 55	75	H	586	593	Right-handed alpha
Helix 56	76	H	602	607	Right-handed alpha
Helix 57	77	H	636	640	Right-handed 310
Helix 58	78	H	663	680	Right-handed alpha
Helix 59	79	H	700	705	Right-handed alpha
Helix 60	30	D	412	416	Right-handed 310
Helix 61	31	D	446	464	Right-handed alpha
Helix 62	32	D	479	484	Right-handed alpha
Helix 63	33	D	531	535	Right-handed 310
Helix 64	34	D	559	573	Right-handed alpha
Helix 65	35	D	586	593	Right-handed alpha
Helix 66	36	D	636	640	Right-handed 310
Helix 67	37	D	663	678	Right-handed alpha
Helix 68	38	D	700	705	Right-handed alpha
Helix 69	10	B	412	416	Right-handed 310
Helix 70	11	B	446	464	Right-handed alpha
Helix 71	12	B	479	484	Right-handed alpha
Helix 72	13	B	531	535	Right-handed 310
Helix 73	14	B	559	573	Right-handed alpha
Helix 74	15	B	586	593	Right-handed alpha
Helix 75	16	B	602	607	Right-handed alpha
Helix 76	17	B	636	640	Right-handed 310
Helix 77	18	B	663	674	Right-handed alpha
Helix 78	19	B	700	705	Right-handed alpha
Helix 79	20	B	711	715	Right-handed 310

There are 24 sheets in PDB entry 3FG6. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	408	410	first strand
Strand 2	A	397	403	anti-parallel
Strand 3	A	424	430	anti-parallel
Strand 4	A	435	441	anti-parallel
Strand 5	A	469	474	parallel

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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	418	419	first strand
Strand 2	A	491	493	parallel
Strand 3	A	524	528	parallel
Strand 4	A	511	516	anti-parallel
Strand 5	A	540	544	anti-parallel
Strand 6	A	549	554	anti-parallel
Strand 7	A	576	581	parallel

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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	627	630	first strand
Strand 2	A	615	620	anti-parallel
Strand 3	A	645	649	anti-parallel
Strand 4	A	654	658	anti-parallel
Strand 5	A	691	695	parallel

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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	407	410	first strand
Strand 2	B	397	404	anti-parallel
Strand 3	B	424	431	anti-parallel
Strand 4	B	434	441	anti-parallel
Strand 5	B	469	474	parallel

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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	418	419	first strand
Strand 2	B	491	493	parallel
Strand 3	B	524	528	parallel
Strand 4	B	511	516	anti-parallel
Strand 5	B	540	544	anti-parallel
Strand 6	B	549	554	anti-parallel
Strand 7	B	576	581	parallel

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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	627	630	first strand
Strand 2	B	615	620	anti-parallel
Strand 3	B	645	649	anti-parallel
Strand 4	B	654	658	anti-parallel
Strand 5	B	691	695	parallel

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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	408	410	first strand
Strand 2	C	397	403	anti-parallel
Strand 3	C	424	431	anti-parallel
Strand 4	C	434	441	anti-parallel
Strand 5	C	469	474	parallel

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There are 7 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	418	419	first strand
Strand 2	C	491	493	parallel
Strand 3	C	524	528	parallel
Strand 4	C	511	516	anti-parallel
Strand 5	C	540	544	anti-parallel
Strand 6	C	549	554	anti-parallel
Strand 7	C	576	581	parallel

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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	627	630	first strand
Strand 2	C	615	620	anti-parallel
Strand 3	C	645	649	anti-parallel
Strand 4	C	654	658	anti-parallel
Strand 5	C	691	695	parallel

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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	407	410	first strand
Strand 2	D	397	404	anti-parallel
Strand 3	D	424	431	anti-parallel
Strand 4	D	434	441	anti-parallel
Strand 5	D	469	474	parallel

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There are 7 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	418	419	first strand
Strand 2	D	491	493	parallel
Strand 3	D	523	528	parallel
Strand 4	D	511	517	anti-parallel
Strand 5	D	540	544	anti-parallel
Strand 6	D	549	554	anti-parallel
Strand 7	D	576	581	parallel

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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	627	630	first strand
Strand 2	D	615	620	anti-parallel
Strand 3	D	645	649	anti-parallel
Strand 4	D	654	658	anti-parallel
Strand 5	D	691	695	parallel

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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	409	410	first strand
Strand 2	E	397	402	anti-parallel
Strand 3	E	424	430	anti-parallel
Strand 4	E	435	441	anti-parallel
Strand 5	E	469	474	parallel

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There are 7 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	418	419	first strand
Strand 2	E	491	493	parallel
Strand 3	E	524	528	parallel
Strand 4	E	511	516	anti-parallel
Strand 5	E	540	545	anti-parallel
Strand 6	E	549	554	anti-parallel
Strand 7	E	576	581	parallel

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There are 5 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	627	630	first strand
Strand 2	E	615	620	anti-parallel
Strand 3	E	645	649	anti-parallel
Strand 4	E	654	658	anti-parallel
Strand 5	E	691	695	parallel

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There are 5 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	409	410	first strand
Strand 2	F	397	402	anti-parallel
Strand 3	F	424	430	anti-parallel
Strand 4	F	436	441	anti-parallel
Strand 5	F	469	474	parallel

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There are 7 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	418	419	first strand
Strand 2	F	491	493	parallel
Strand 3	F	524	528	parallel
Strand 4	F	511	516	anti-parallel
Strand 5	F	540	545	anti-parallel
Strand 6	F	549	554	anti-parallel
Strand 7	F	576	581	parallel

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There are 5 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	627	630	first strand
Strand 2	F	615	620	anti-parallel
Strand 3	F	645	649	anti-parallel
Strand 4	F	654	658	anti-parallel
Strand 5	F	691	695	parallel

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There are 5 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	408	410	first strand
Strand 2	G	397	403	anti-parallel
Strand 3	G	424	431	anti-parallel
Strand 4	G	434	441	anti-parallel
Strand 5	G	469	474	parallel

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There are 7 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	418	419	first strand
Strand 2	G	491	493	parallel
Strand 3	G	524	528	parallel
Strand 4	G	511	516	anti-parallel
Strand 5	G	540	544	anti-parallel
Strand 6	G	549	554	anti-parallel
Strand 7	G	576	581	parallel

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There are 5 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	627	630	first strand
Strand 2	G	615	620	anti-parallel
Strand 3	G	645	649	anti-parallel
Strand 4	G	654	658	anti-parallel
Strand 5	G	691	695	parallel

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There are 5 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	407	410	first strand
Strand 2	H	397	404	anti-parallel
Strand 3	H	424	430	anti-parallel
Strand 4	H	435	441	anti-parallel
Strand 5	H	469	474	parallel

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There are 7 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	418	419	first strand
Strand 2	H	491	493	parallel
Strand 3	H	523	528	parallel
Strand 4	H	511	517	anti-parallel
Strand 5	H	540	544	anti-parallel
Strand 6	H	549	554	anti-parallel
Strand 7	H	576	581	parallel

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There are 5 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	627	630	first strand
Strand 2	H	615	620	anti-parallel
Strand 3	H	645	649	anti-parallel
Strand 4	H	654	658	anti-parallel
Strand 5	H	691	695	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3FG6

Analysis of interatomic Contacts of Structural Units in PDB entry:
3FG6