Analysis of interatomic Contacts of Structural Units in PDB entry:
3FGQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3FGQ entry

There are 2 chains in PDB entry 3FGQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 22MET 400
B
 PRO 22MET 400
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 3FGQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
24 41Right-handed alpha
Helix 2
2
A
49 64Right-handed alpha
Helix 3
3
A
65 77Right-handed alpha
Helix 4
4
A
84 88Right-handed 310
Helix 5
5
A
89 98Right-handed alpha
Helix 6
6
A
121 132Right-handed alpha
Helix 7
7
A
143 159Right-handed alpha
Helix 8
8
A
168 173Right-handed 310
Helix 9
9
A
195 199Right-handed 310
Helix 10
10
A
263 271Right-handed 310
Helix 11
11
A
272 283Right-handed alpha
Helix 12
12
A
303 309Right-handed alpha
Helix 13
13
A
313 317Right-handed 310
Helix 14
14
A
359 367Right-handed 310
Helix 15
15
B
24 41Right-handed alpha
Helix 16
16
B
49 64Right-handed alpha
Helix 17
17
B
65 77Right-handed alpha
Helix 18
18
B
84 88Right-handed 310
Helix 19
19
B
89 98Right-handed alpha
Helix 20
20
B
121 132Right-handed alpha
Helix 21
21
B
143 159Right-handed alpha
Helix 22
22
B
168 173Right-handed 310
Helix 23
23
B
195 199Right-handed 310
Helix 24
24
B
263 271Right-handed 310
Helix 25
25
B
272 283Right-handed alpha
Helix 26
26
B
303 309Right-handed alpha
Helix 27
27
B
313 317Right-handed 310
Helix 28
28
B
359 367Right-handed 310
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There are 6 sheets in PDB entry 3FGQ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 48first strand
Strand 2
A
388 394anti-parallel
Strand 3
A
376 382anti-parallel
Strand 4
A
251 257anti-parallel
Strand 5
A
238 245anti-parallel
Strand 6
A
211 229anti-parallel
Strand 7
A
200 205anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 48first strand
Strand 2
A
388 394anti-parallel
Strand 3
A
376 382anti-parallel
Strand 4
A
251 257anti-parallel
Strand 5
A
238 245anti-parallel
Strand 6
A
211 229anti-parallel
Strand 7
A
284 293anti-parallel
Strand 8
A
369 371parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
134 139first strand
Strand 2
A
104 115parallel
Strand 3
A
178 188anti-parallel
Strand 4
A
335 344parallel
Strand 5
A
295 302anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
46 48first strand
Strand 2
B
388 394anti-parallel
Strand 3
B
376 382anti-parallel
Strand 4
B
251 257anti-parallel
Strand 5
B
238 245anti-parallel
Strand 6
B
211 229anti-parallel
Strand 7
B
200 205anti-parallel
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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
46 48first strand
Strand 2
B
388 394anti-parallel
Strand 3
B
376 382anti-parallel
Strand 4
B
251 257anti-parallel
Strand 5
B
238 245anti-parallel
Strand 6
B
211 229anti-parallel
Strand 7
B
284 293anti-parallel
Strand 8
B
369 371parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
134 139first strand
Strand 2
B
104 115parallel
Strand 3
B
178 188anti-parallel
Strand 4
B
335 344parallel
Strand 5
B
295 302anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il