Analysis of interatomic Contacts of Structural Units in PDB entry:
3FHD


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3FHD entry

There is 1 chain in PDB entry 3FHD (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 7ASN 481
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 3FHD. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 21Right-handed alpha
Helix 2
2
A
24 34Right-handed alpha
Helix 3
3
A
36 43Right-handed alpha
Helix 4
4
A
43 51Right-handed alpha
Helix 5
5
A
60 79Right-handed alpha
Helix 6
6
A
81 91Right-handed alpha
Helix 7
7
A
99 109Right-handed alpha
Helix 8
8
A
111 126Right-handed alpha
Helix 9
9
A
127 132Right-handed 310
Helix 10
10
A
134 140Right-handed alpha
Helix 11
11
A
147 154Right-handed alpha
Helix 12
12
A
180 195Right-handed alpha
Helix 13
13
A
249 252Right-handed 310
Helix 14
14
A
259 271Right-handed alpha
Helix 15
15
A
273 282Right-handed alpha
Helix 16
16
A
308 312Right-handed 310
Helix 17
17
A
322 324Right-handed 310
Helix 18
18
A
325 334Right-handed alpha
Helix 19
19
A
347 352Right-handed alpha
Helix 20
20
A
371 391Right-handed alpha
Helix 21
21
A
445 468Right-handed alpha
Helix 22
22
A
475 481Right-handed alpha
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There are 4 sheets in PDB entry 3FHD. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
143 144first strand
Strand 2
A
216 218parallel
Strand 3
A
208 209anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
201 202first strand
Strand 2
A
222 228anti-parallel
Strand 3
A
234 247anti-parallel
Strand 4
A
401 410parallel
Strand 5
A
433 442anti-parallel
Strand 6
A
340 345anti-parallel
Strand 7
A
357 363anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
289 291first strand
Strand 2
A
304 306parallel
Strand 3
A
366 367anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
421 422first strand
Strand 2
A
425 426anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il