Analysis of interatomic Contacts of Structural Units in PDB entry:
3FHQ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3FHQ entry

There are 4 chains in PDB entry 3FHQ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 2	ASP 615
B	THR 2	ASP 615
D	THR 2	ASP 615
F	THR 2	ASP 615

There are 76 helices in PDB entry 3FHQ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	12	18	Right-handed alpha
Helix 2	2	A	20	24	Right-handed 310
Helix 3	3	A	26	31	Right-handed 310
Helix 4	4	A	83	87	Right-handed 310
Helix 5	5	A	106	116	Right-handed alpha
Helix 6	6	A	128	132	Right-handed 310
Helix 7	7	A	134	142	Right-handed alpha
Helix 8	8	A	150	164	Right-handed alpha
Helix 9	9	A	178	196	Right-handed alpha
Helix 10	10	A	224	227	Right-handed 310
Helix 11	11	A	248	258	Right-handed alpha
Helix 12	12	A	261	263	Right-handed 310
Helix 13	13	A	274	278	Right-handed 310
Helix 14	14	A	281	285	Right-handed 310
Helix 15	15	A	302	307	Right-handed alpha
Helix 16	16	A	310	323	Right-handed alpha
Helix 17	17	A	340	344	Right-handed 310
Helix 18	18	A	383	386	Right-handed 310
Helix 19	19	A	492	495	Right-handed 310
Helix 20	20	B	12	18	Right-handed alpha
Helix 21	21	B	20	24	Right-handed 310
Helix 22	22	B	26	31	Right-handed 310
Helix 23	23	B	83	87	Right-handed 310
Helix 24	24	B	106	116	Right-handed alpha
Helix 25	25	B	128	132	Right-handed 310
Helix 26	26	B	134	142	Right-handed alpha
Helix 27	27	B	150	164	Right-handed alpha
Helix 28	28	B	178	196	Right-handed alpha
Helix 29	29	B	224	227	Right-handed 310
Helix 30	30	B	248	258	Right-handed alpha
Helix 31	31	B	261	263	Right-handed 310
Helix 32	32	B	274	278	Right-handed 310
Helix 33	33	B	281	285	Right-handed 310
Helix 34	34	B	302	307	Right-handed alpha
Helix 35	35	B	310	323	Right-handed alpha
Helix 36	36	B	340	344	Right-handed 310
Helix 37	37	B	383	386	Right-handed 310
Helix 38	38	B	492	495	Right-handed 310
Helix 39	39	D	12	18	Right-handed alpha
Helix 40	40	D	20	24	Right-handed 310
Helix 41	41	D	26	31	Right-handed 310
Helix 42	42	D	83	87	Right-handed 310
Helix 43	43	D	106	116	Right-handed alpha
Helix 44	44	D	128	132	Right-handed 310
Helix 45	45	D	134	142	Right-handed alpha
Helix 46	46	D	150	164	Right-handed alpha
Helix 47	47	D	178	196	Right-handed alpha
Helix 48	48	D	224	227	Right-handed 310
Helix 49	49	D	248	258	Right-handed alpha
Helix 50	50	D	261	263	Right-handed 310
Helix 51	51	D	274	278	Right-handed 310
Helix 52	52	D	281	285	Right-handed 310
Helix 53	53	D	302	307	Right-handed alpha
Helix 54	54	D	310	323	Right-handed alpha
Helix 55	55	D	340	344	Right-handed 310
Helix 56	56	D	383	386	Right-handed 310
Helix 57	57	D	492	495	Right-handed 310
Helix 58	58	F	12	18	Right-handed alpha
Helix 59	59	F	20	24	Right-handed 310
Helix 60	60	F	26	31	Right-handed 310
Helix 61	61	F	83	87	Right-handed 310
Helix 62	62	F	106	116	Right-handed alpha
Helix 63	63	F	128	132	Right-handed 310
Helix 64	64	F	134	142	Right-handed alpha
Helix 65	65	F	150	164	Right-handed alpha
Helix 66	66	F	178	196	Right-handed alpha
Helix 67	67	F	224	227	Right-handed 310
Helix 68	68	F	248	258	Right-handed alpha
Helix 69	69	F	261	263	Right-handed 310
Helix 70	70	F	274	278	Right-handed 310
Helix 71	71	F	281	285	Right-handed 310
Helix 72	72	F	302	307	Right-handed alpha
Helix 73	73	F	310	323	Right-handed alpha
Helix 74	74	F	340	344	Right-handed 310
Helix 75	75	F	383	386	Right-handed 310
Helix 76	76	F	492	495	Right-handed 310

There are 40 sheets in PDB entry 3FHQ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	41	42	first strand
Strand 2	A	348	349	anti-parallel

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There are 10 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	102	103	first strand
Strand 2	A	120	126	anti-parallel
Strand 3	A	167	172	parallel
Strand 4	A	201	205	parallel
Strand 5	A	238	241	parallel
Strand 6	A	265	270	parallel
Strand 7	A	295	299	parallel
Strand 8	A	55	59	parallel
Strand 9	A	89	92	parallel
Strand 10	A	120	126	parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	229	230	first strand
Strand 2	A	233	234	anti-parallel

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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	356	358	first strand
Strand 2	A	513	524	anti-parallel
Strand 3	A	416	422	anti-parallel
Strand 4	A	400	406	anti-parallel

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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	356	358	first strand
Strand 2	A	513	524	anti-parallel
Strand 3	A	445	452	anti-parallel
Strand 4	A	484	490	anti-parallel
Strand 5	A	477	481	anti-parallel

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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	364	365	first strand
Strand 2	A	380	381	anti-parallel

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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	368	370	first strand
Strand 2	A	373	376	anti-parallel

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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	395	397	first strand
Strand 2	A	428	439	anti-parallel
Strand 3	A	498	507	anti-parallel
Strand 4	A	459	464	anti-parallel
Strand 5	A	471	473	anti-parallel

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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	536	538	first strand
Strand 2	A	547	550	anti-parallel
Strand 3	A	580	583	anti-parallel

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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	569	576	first strand
Strand 2	A	557	566	anti-parallel
Strand 3	A	597	603	anti-parallel
Strand 4	A	612	614	anti-parallel

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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	41	42	first strand
Strand 2	B	348	349	anti-parallel

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There are 10 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	102	103	first strand
Strand 2	B	120	126	anti-parallel
Strand 3	B	167	172	parallel
Strand 4	B	201	205	parallel
Strand 5	B	238	241	parallel
Strand 6	B	265	270	parallel
Strand 7	B	295	299	parallel
Strand 8	B	55	59	parallel
Strand 9	B	89	92	parallel
Strand 10	B	120	126	parallel

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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	229	230	first strand
Strand 2	B	233	234	anti-parallel

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There are 4 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	356	358	first strand
Strand 2	B	513	524	anti-parallel
Strand 3	B	416	422	anti-parallel
Strand 4	B	400	406	anti-parallel

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There are 5 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	356	358	first strand
Strand 2	B	513	524	anti-parallel
Strand 3	B	445	452	anti-parallel
Strand 4	B	484	490	anti-parallel
Strand 5	B	477	481	anti-parallel

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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	364	365	first strand
Strand 2	B	380	381	anti-parallel

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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	368	370	first strand
Strand 2	B	373	376	anti-parallel

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There are 5 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	395	397	first strand
Strand 2	B	428	439	anti-parallel
Strand 3	B	498	507	anti-parallel
Strand 4	B	459	464	anti-parallel
Strand 5	B	471	473	anti-parallel

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There are 3 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	536	539	first strand
Strand 2	B	546	550	anti-parallel
Strand 3	B	580	584	anti-parallel

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There are 4 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	569	576	first strand
Strand 2	B	557	566	anti-parallel
Strand 3	B	597	603	anti-parallel
Strand 4	B	612	614	anti-parallel

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There are 2 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	41	42	first strand
Strand 2	D	348	349	anti-parallel

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There are 10 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	102	103	first strand
Strand 2	D	120	126	anti-parallel
Strand 3	D	167	172	parallel
Strand 4	D	201	205	parallel
Strand 5	D	238	241	parallel
Strand 6	D	265	270	parallel
Strand 7	D	295	299	parallel
Strand 8	D	55	59	parallel
Strand 9	D	89	92	parallel
Strand 10	D	120	126	parallel

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There are 2 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	229	230	first strand
Strand 2	D	233	234	anti-parallel

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There are 4 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	356	358	first strand
Strand 2	D	513	524	anti-parallel
Strand 3	D	416	422	anti-parallel
Strand 4	D	400	406	anti-parallel

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There are 5 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	356	358	first strand
Strand 2	D	513	524	anti-parallel
Strand 3	D	445	452	anti-parallel
Strand 4	D	484	490	anti-parallel
Strand 5	D	477	481	anti-parallel

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There are 2 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	364	365	first strand
Strand 2	D	380	381	anti-parallel

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There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	368	370	first strand
Strand 2	D	373	376	anti-parallel

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There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	395	397	first strand
Strand 2	D	428	439	anti-parallel
Strand 3	D	498	507	anti-parallel
Strand 4	D	459	464	anti-parallel
Strand 5	D	471	473	anti-parallel

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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	536	539	first strand
Strand 2	D	547	550	anti-parallel
Strand 3	D	580	583	anti-parallel

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There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	569	576	first strand
Strand 2	D	557	566	anti-parallel
Strand 3	D	597	603	anti-parallel
Strand 4	D	612	614	anti-parallel

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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	41	42	first strand
Strand 2	F	348	349	anti-parallel

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There are 10 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	102	103	first strand
Strand 2	F	120	126	anti-parallel
Strand 3	F	167	172	parallel
Strand 4	F	201	205	parallel
Strand 5	F	238	241	parallel
Strand 6	F	265	270	parallel
Strand 7	F	295	299	parallel
Strand 8	F	55	59	parallel
Strand 9	F	89	92	parallel
Strand 10	F	120	126	parallel

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There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	229	230	first strand
Strand 2	F	233	234	anti-parallel

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There are 4 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	356	358	first strand
Strand 2	F	513	524	anti-parallel
Strand 3	F	416	422	anti-parallel
Strand 4	F	400	406	anti-parallel

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There are 5 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	356	358	first strand
Strand 2	F	513	524	anti-parallel
Strand 3	F	445	452	anti-parallel
Strand 4	F	484	490	anti-parallel
Strand 5	F	477	481	anti-parallel

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There are 2 strands in AJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	364	365	first strand
Strand 2	F	380	381	anti-parallel

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There are 2 strands in AK sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	368	370	first strand
Strand 2	F	373	376	anti-parallel

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There are 5 strands in AL sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	395	397	first strand
Strand 2	F	428	439	anti-parallel
Strand 3	F	498	507	anti-parallel
Strand 4	F	459	464	anti-parallel
Strand 5	F	471	473	anti-parallel

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There are 3 strands in AM sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	536	539	first strand
Strand 2	F	547	550	anti-parallel
Strand 3	F	580	583	anti-parallel

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There are 4 strands in AN sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	569	576	first strand
Strand 2	F	557	566	anti-parallel
Strand 3	F	597	603	anti-parallel
Strand 4	F	612	614	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3FHQ

Analysis of interatomic Contacts of Structural Units in PDB entry:
3FHQ