Analysis of interatomic Contacts of Structural Units in PDB entry:
3FJO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3FJO entry

There is 1 chain in PDB entry 3FJO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 47SER 657
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 3FJO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
49 57Right-handed alpha
Helix 2
2
A
70 88Right-handed alpha
Helix 3
3
A
97 99Right-handed 310
Helix 4
4
A
103 107Right-handed 310
Helix 5
5
A
124 126Right-handed 310
Helix 6
6
A
127 137Right-handed alpha
Helix 7
7
A
161 174Right-handed alpha
Helix 8
8
A
191 211Right-handed alpha
Helix 9
9
A
234 238Right-handed 310
Helix 10
10
A
247 252Right-handed alpha
Helix 11
11
A
307 319Right-handed alpha
Helix 12
12
A
347 354Right-handed alpha
Helix 13
13
A
362 370Right-handed alpha
Helix 14
14
A
371 373Right-handed 310
Helix 15
15
A
375 386Right-handed alpha
Helix 16
16
A
389 400Right-handed alpha
Helix 17
17
A
406 414Right-handed alpha
Helix 18
18
A
420 428Right-handed alpha
Helix 19
19
A
468 477Right-handed alpha
Helix 20
20
A
513 516Right-handed 310
Helix 21
21
A
517 533Right-handed alpha
Helix 22
22
A
555 565Right-handed alpha
Helix 23
23
A
584 592Right-handed alpha
Helix 24
24
A
592 602Right-handed alpha
Helix 25
25
A
612 632Right-handed alpha
Helix 26
26
A
634 649Right-handed alpha
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There are 6 sheets in PDB entry 3FJO. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 95first strand
Strand 2
A
61 66parallel
Strand 3
A
110 116parallel
Strand 4
A
146 153parallel
Strand 5
A
177 178parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 95first strand
Strand 2
A
61 66parallel
Strand 3
A
110 116parallel
Strand 4
A
146 153parallel
Strand 5
A
183 186parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
225 229first strand
Strand 2
A
325 330anti-parallel
Strand 3
A
345 346anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
434 437first strand
Strand 2
A
299 302anti-parallel
Strand 3
A
488 494anti-parallel
Strand 4
A
262 271anti-parallel
Strand 5
A
280 286anti-parallel
Strand 6
A
448 454anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
457 459first strand
Strand 2
A
465 467anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
570 575first strand
Strand 2
A
540 546parallel
Strand 3
A
508 511parallel
Strand 4
A
605 610parallel
Strand 5
A
651 655parallel
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