Analysis of interatomic Contacts of Structural Units in PDB entry:
3FKJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3FKJ entry

There are 2 chains in PDB entry 3FKJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU -6TYR 328
B
 MSE 1TYR 328
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 3FKJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 17Right-handed alpha
Helix 2
2
A
30 35Right-handed alpha
Helix 3
3
A
36 47Right-handed alpha
Helix 4
4
A
57 63Right-handed alpha
Helix 5
5
A
83 97Right-handed alpha
Helix 6
6
A
109 114Right-handed alpha
Helix 7
7
A
131 134Right-handed 310
Helix 8
8
A
135 152Right-handed alpha
Helix 9
9
A
156 166Right-handed alpha
Helix 10
10
A
166 178Right-handed alpha
Helix 11
11
A
178 190Right-handed alpha
Helix 12
12
A
203 214Right-handed alpha
Helix 13
13
A
214 220Right-handed alpha
Helix 14
14
A
229 239Right-handed 310
Helix 15
15
A
254 268Right-handed alpha
Helix 16
16
A
278 281Right-handed 310
Helix 17
17
A
289 292Right-handed 310
Helix 18
18
A
293 313Right-handed alpha
Helix 19
19
B
2 17Right-handed alpha
Helix 20
20
B
30 35Right-handed alpha
Helix 21
21
B
36 47Right-handed alpha
Helix 22
22
B
57 63Right-handed alpha
Helix 23
23
B
83 96Right-handed alpha
Helix 24
24
B
109 115Right-handed 310
Helix 25
25
B
131 134Right-handed 310
Helix 26
26
B
135 152Right-handed alpha
Helix 27
27
B
156 178Right-handed alpha
Helix 28
28
B
178 190Right-handed alpha
Helix 29
29
B
203 214Right-handed alpha
Helix 30
30
B
214 220Right-handed alpha
Helix 31
31
B
229 239Right-handed 310
Helix 32
32
B
251 253Right-handed 310
Helix 33
33
B
254 268Right-handed alpha
Helix 34
34
B
281 286Right-handed alpha
Helix 35
35
B
289 292Right-handed 310
Helix 36
36
B
293 313Right-handed alpha
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There are 4 sheets in PDB entry 3FKJ. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 56first strand
Strand 2
A
23 28parallel
Strand 3
A
72 78parallel
Strand 4
A
99 104parallel
Strand 5
A
117 120parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
222 227first strand
Strand 2
A
194 199parallel
Strand 3
A
244 249parallel
Strand 4
A
271 276parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
51 56first strand
Strand 2
B
23 28parallel
Strand 3
B
72 77parallel
Strand 4
B
99 104parallel
Strand 5
B
117 120parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
222 227first strand
Strand 2
B
194 199parallel
Strand 3
B
244 249parallel
Strand 4
B
271 276parallel
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