Analysis of interatomic Contacts of Structural Units in PDB entry:
3FKQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3FKQ entry

There is 1 chain in PDB entry 3FKQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1GLN 354
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 3FKQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 26Right-handed alpha
Helix 2
2
A
37 49Right-handed alpha
Helix 3
3
A
62 67Right-handed 310
Helix 4
4
A
95 114Right-handed alpha
Helix 5
5
A
137 153Right-handed alpha
Helix 6
6
A
166 171Right-handed alpha
Helix 7
7
A
178 188Right-handed alpha
Helix 8
8
A
192 200Right-handed alpha
Helix 9
9
A
216 223Right-handed 310
Helix 10
10
A
224 238Right-handed alpha
Helix 11
11
A
253 261Right-handed alpha
Helix 12
12
A
273 291Right-handed alpha
Helix 13
13
A
298 300Right-handed 310
Helix 14
14
A
335 345Right-handed alpha
Helix 15
15
A
348 353Right-handed alpha
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There are 2 sheets in PDB entry 3FKQ. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 35first strand
Strand 2
A
3 8parallel
Strand 3
A
52 56parallel
Strand 4
A
71 76parallel
Strand 5
A
87 91parallel
Strand 6
A
83 84anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
202 203first strand
Strand 2
A
209 210anti-parallel
Strand 3
A
156 160parallel
Strand 4
A
243 247parallel
Strand 5
A
125 130parallel
Strand 6
A
265 270parallel
Strand 7
A
302 306parallel
Strand 8
A
323 327parallel
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