Analysis of interatomic Contacts of Structural Units in PDB entry:
3FKT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3FKT entry

There is 1 chain in PDB entry 3FKT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 17GLY 403
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 12 helices in PDB entry 3FKT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
19 23Right-handed 310
Helix 2
2
A
73 77Right-handed 310
Helix 3
3
A
143 147Right-handed 310
Helix 4
4
A
155 164Right-handed alpha
Helix 5
5
A
200 202Right-handed 310
Helix 6
6
A
236 241Right-handed alpha
Helix 7
7
A
258 272Right-handed alpha
Helix 8
8
A
278 283Right-handed alpha
Helix 9
9
A
296 300Right-handed 310
Helix 10
10
A
321 325Right-handed alpha
Helix 11
11
A
354 359Right-handed alpha
Helix 12
12
A
398 403Right-handed 310
Back to top of page

There are 5 sheets in PDB entry 3FKT. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
81 90first strand
Strand 2
A
95 106anti-parallel
Strand 3
A
34 40anti-parallel
Strand 4
A
26 28anti-parallel
Strand 5
A
191 196anti-parallel
Strand 6
A
170 175anti-parallel
Strand 7
A
361 366anti-parallel
Strand 8
A
371 377anti-parallel
Strand 9
A
204 212anti-parallel
Back to list of sheets
Back to top of page

There are 13 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
81 90first strand
Strand 2
A
95 106anti-parallel
Strand 3
A
115 126anti-parallel
Strand 4
A
58 61parallel
Strand 5
A
137 140anti-parallel
Strand 6
A
45 52parallel
Strand 7
A
34 40anti-parallel
Strand 8
A
26 28anti-parallel
Strand 9
A
191 196anti-parallel
Strand 10
A
170 175anti-parallel
Strand 11
A
361 366anti-parallel
Strand 12
A
371 377anti-parallel
Strand 13
A
204 212anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
220 221first strand
Strand 2
A
245 247anti-parallel
Strand 3
A
351 353parallel
Strand 4
A
254 257anti-parallel
Strand 5
A
344 347parallel
Back to list of sheets
Back to top of page

There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
231 232first strand
Strand 2
A
223 228anti-parallel
Strand 3
A
303 308anti-parallel
Strand 4
A
314 320anti-parallel
Strand 5
A
389 395anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
288 291first strand
Strand 2
A
337 342anti-parallel
Strand 3
A
326 328anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il