Analysis of interatomic Contacts of Structural Units in PDB entry:
3FMS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3FMS entry

There is 1 chain in PDB entry 3FMS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
VAL 6SER 214
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 3FMS. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
6 23Right-handed alpha
Helix 2
2
A
33 42Right-handed alpha
Helix 3
3
A
44 59Right-handed alpha
Helix 4
4
A
75 97Right-handed alpha
Helix 5
5
A
97 103Right-handed alpha
Helix 6
6
A
104 121Right-handed alpha
Helix 7
7
A
122 140Right-handed alpha
Helix 8
8
A
143 153Right-handed alpha
Helix 9
9
A
153 163Right-handed alpha
Helix 10
10
A
166 183Right-handed alpha
Helix 11
11
A
185 208Right-handed alpha
Helix 12
12
A
209 211Right-handed 310
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There is 1 sheet ( A) in PDB entry 3FMS.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
61 64first strand
Strand 2
A
68 71anti-parallel
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