Analysis of interatomic Contacts of Structural Units in PDB entry:
3FO5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3FO5 entry

There are 2 chains in PDB entry 3FO5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 346ARG 584
B
 ALA 352GLN 592
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 3FO5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
346 364Right-handed alpha
Helix 2
2
A
380 382Right-handed 310
Helix 3
3
A
383 400Right-handed alpha
Helix 4
4
A
435 445Right-handed alpha
Helix 5
5
A
446 452Right-handed 310
Helix 6
6
A
551 553Right-handed 310
Helix 7
7
A
554 563Right-handed alpha
Helix 8
8
A
567 583Right-handed alpha
Helix 9
9
B
352 365Right-handed alpha
Helix 10
10
B
380 382Right-handed 310
Helix 11
11
B
383 401Right-handed alpha
Helix 12
12
B
435 445Right-handed alpha
Helix 13
13
B
446 452Right-handed 310
Helix 14
14
B
551 553Right-handed 310
Helix 15
15
B
554 563Right-handed alpha
Helix 16
16
B
567 583Right-handed alpha
Helix 17
17
B
587 592Right-handed alpha
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There are 4 sheets in PDB entry 3FO5. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
376 378first strand
Strand 2
A
504 512parallel
Strand 3
A
486 495anti-parallel
Strand 4
A
469 476anti-parallel
Strand 5
A
458 466anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
405 410first strand
Strand 2
A
413 419anti-parallel
Strand 3
A
424 432anti-parallel
Strand 4
A
541 548anti-parallel
Strand 5
A
530 538anti-parallel
Strand 6
A
504 512anti-parallel
Strand 7
A
486 495anti-parallel
Strand 8
A
523 524parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
377 378first strand
Strand 2
B
504 512parallel
Strand 3
B
486 495anti-parallel
Strand 4
B
469 476anti-parallel
Strand 5
B
458 466anti-parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
405 410first strand
Strand 2
B
413 419anti-parallel
Strand 3
B
424 432anti-parallel
Strand 4
B
541 548anti-parallel
Strand 5
B
530 538anti-parallel
Strand 6
B
504 512anti-parallel
Strand 7
B
486 495anti-parallel
Strand 8
B
523 524parallel
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