Analysis of interatomic Contacts of Structural Units in PDB entry:
3FOC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3FOC entry

There are 2 chains in PDB entry 3FOC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLN 429
B
 THR 3GLN 429
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 3FOC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 20Right-handed alpha
Helix 2
2
A
27 39Right-handed alpha
Helix 3
3
A
43 48Right-handed alpha
Helix 4
4
A
56 66Right-handed alpha
Helix 5
5
A
84 102Right-handed alpha
Helix 6
6
A
110 118Right-handed alpha
Helix 7
7
A
122 139Right-handed alpha
Helix 8
8
A
143 145Right-handed 310
Helix 9
9
A
152 156Right-handed alpha
Helix 10
10
A
160 171Right-handed alpha
Helix 11
11
A
173 182Right-handed alpha
Helix 12
12
A
188 193Right-handed alpha
Helix 13
13
A
194 200Right-handed alpha
Helix 14
14
A
201 208Right-handed 310
Helix 15
15
A
210 214Right-handed 310
Helix 16
16
A
247 256Right-handed alpha
Helix 17
17
A
257 262Right-handed 310
Helix 18
18
A
275 286Right-handed alpha
Helix 19
19
A
316 320Right-handed 310
Helix 20
20
A
326 338Right-handed alpha
Helix 21
21
A
345 351Right-handed alpha
Helix 22
22
A
359 369Right-handed alpha
Helix 23
23
A
371 384Right-handed alpha
Helix 24
24
A
388 413Right-handed alpha
Helix 25
25
A
415 424Right-handed alpha
Helix 26
26
B
6 18Right-handed alpha
Helix 27
27
B
27 39Right-handed alpha
Helix 28
28
B
43 48Right-handed alpha
Helix 29
29
B
56 66Right-handed alpha
Helix 30
30
B
84 102Right-handed alpha
Helix 31
31
B
110 118Right-handed alpha
Helix 32
32
B
122 139Right-handed alpha
Helix 33
33
B
143 145Right-handed 310
Helix 34
34
B
152 156Right-handed alpha
Helix 35
35
B
160 171Right-handed alpha
Helix 36
36
B
173 182Right-handed alpha
Helix 37
37
B
188 193Right-handed alpha
Helix 38
38
B
194 200Right-handed alpha
Helix 39
39
B
201 208Right-handed 310
Helix 40
40
B
210 214Right-handed 310
Helix 41
41
B
247 256Right-handed alpha
Helix 42
42
B
257 260Right-handed 310
Helix 43
43
B
275 286Right-handed alpha
Helix 44
44
B
316 320Right-handed 310
Helix 45
45
B
326 338Right-handed alpha
Helix 46
46
B
359 369Right-handed alpha
Helix 47
47
B
371 385Right-handed alpha
Helix 48
48
B
388 412Right-handed alpha
Helix 49
49
B
415 424Right-handed alpha
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There are 2 sheets in PDB entry 3FOC. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 55first strand
Strand 2
A
295 299anti-parallel
Strand 3
A
266 271parallel
Strand 4
A
70 76parallel
Strand 5
A
104 109parallel
Strand 6
A
147 151parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
51 55first strand
Strand 2
B
295 299anti-parallel
Strand 3
B
266 271parallel
Strand 4
B
70 76parallel
Strand 5
B
104 109parallel
Strand 6
B
147 151parallel
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