Analysis of interatomic Contacts of Structural Units in PDB entry:
3FOK

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3FOK entry

There are 10 chains in PDB entry 3FOK (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 3	ILE 299
B	PRO 3	ILE 299
C	PRO 3	ILE 299
D	PRO 3	ILE 299
E	PRO 3	ILE 299
F	PRO 3	ILE 299
G	PRO 3	ILE 299
H	PRO 3	ILE 299
I	PRO 3	ILE 299
J	PRO 3	ILE 299

There are120 helices in PDB entry 3FOK. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	7	21	Right-handed alpha
Helix 2	2	A	22	31	Right-handed alpha
Helix 3	3	A	51	55	Right-handed 310
Helix 4	4	A	68	82	Right-handed alpha
Helix 5	5	A	91	101	Right-handed alpha
Helix 6	6	A	133	141	Right-handed alpha
Helix 7	7	A	157	175	Right-handed alpha
Helix 8	8	A	198	211	Right-handed alpha
Helix 9	9	A	228	233	Right-handed alpha
Helix 10	10	A	234	236	Right-handed 310
Helix 11	11	A	251	262	Right-handed alpha
Helix 12	12	A	283	296	Right-handed alpha
Helix 13	13	B	7	21	Right-handed alpha
Helix 14	14	B	22	31	Right-handed alpha
Helix 15	15	B	51	55	Right-handed 310
Helix 16	16	B	68	82	Right-handed alpha
Helix 17	17	B	91	102	Right-handed alpha
Helix 18	18	B	133	141	Right-handed alpha
Helix 19	19	B	157	175	Right-handed alpha
Helix 20	20	B	198	211	Right-handed alpha
Helix 21	21	B	228	233	Right-handed alpha
Helix 22	22	B	234	236	Right-handed 310
Helix 23	23	B	251	262	Right-handed alpha
Helix 24	24	B	283	296	Right-handed alpha
Helix 25	25	C	7	21	Right-handed alpha
Helix 26	26	C	22	31	Right-handed alpha
Helix 27	27	C	51	55	Right-handed 310
Helix 28	28	C	68	82	Right-handed alpha
Helix 29	29	C	91	101	Right-handed alpha
Helix 30	30	C	133	141	Right-handed alpha
Helix 31	31	C	157	175	Right-handed alpha
Helix 32	32	C	198	211	Right-handed alpha
Helix 33	33	C	228	233	Right-handed alpha
Helix 34	34	C	234	236	Right-handed 310
Helix 35	35	C	251	262	Right-handed alpha
Helix 36	36	C	283	296	Right-handed alpha
Helix 37	37	D	7	21	Right-handed alpha
Helix 38	38	D	22	31	Right-handed alpha
Helix 39	39	D	51	55	Right-handed 310
Helix 40	40	D	68	82	Right-handed alpha
Helix 41	41	D	91	102	Right-handed alpha
Helix 42	42	D	133	141	Right-handed alpha
Helix 43	43	D	157	175	Right-handed alpha
Helix 44	44	D	198	211	Right-handed alpha
Helix 45	45	D	228	233	Right-handed alpha
Helix 46	46	D	234	236	Right-handed 310
Helix 47	47	D	251	262	Right-handed alpha
Helix 48	48	D	283	296	Right-handed alpha
Helix 49	49	E	7	20	Right-handed alpha
Helix 50	50	E	22	31	Right-handed alpha
Helix 51	51	E	51	55	Right-handed 310
Helix 52	52	E	68	82	Right-handed alpha
Helix 53	53	E	91	101	Right-handed alpha
Helix 54	54	E	133	141	Right-handed alpha
Helix 55	55	E	157	175	Right-handed alpha
Helix 56	56	E	198	211	Right-handed alpha
Helix 57	57	E	228	233	Right-handed alpha
Helix 58	58	E	234	236	Right-handed 310
Helix 59	59	E	251	262	Right-handed alpha
Helix 60	60	E	283	296	Right-handed alpha
Helix 61	61	F	7	21	Right-handed alpha
Helix 62	62	F	21	31	Right-handed alpha
Helix 63	63	F	51	55	Right-handed 310
Helix 64	64	F	68	82	Right-handed alpha
Helix 65	65	F	91	102	Right-handed alpha
Helix 66	66	F	133	141	Right-handed alpha
Helix 67	67	F	157	175	Right-handed alpha
Helix 68	68	F	198	211	Right-handed alpha
Helix 69	69	F	228	233	Right-handed alpha
Helix 70	70	F	234	236	Right-handed 310
Helix 71	71	F	251	262	Right-handed alpha
Helix 72	72	F	283	296	Right-handed alpha
Helix 73	73	G	7	21	Right-handed alpha
Helix 74	74	G	22	31	Right-handed alpha
Helix 75	75	G	51	55	Right-handed 310
Helix 76	76	G	68	82	Right-handed alpha
Helix 77	77	G	91	101	Right-handed alpha
Helix 78	78	G	133	141	Right-handed alpha
Helix 79	79	G	157	175	Right-handed alpha
Helix 80	80	G	198	211	Right-handed alpha
Helix 81	81	G	228	233	Right-handed alpha
Helix 82	82	G	234	236	Right-handed 310
Helix 83	83	G	251	262	Right-handed alpha
Helix 84	84	G	283	296	Right-handed alpha
Helix 85	85	H	7	21	Right-handed alpha
Helix 86	86	H	21	31	Right-handed alpha
Helix 87	87	H	51	55	Right-handed 310
Helix 88	88	H	68	82	Right-handed alpha
Helix 89	89	H	91	101	Right-handed alpha
Helix 90	90	H	133	141	Right-handed alpha
Helix 91	91	H	157	175	Right-handed alpha
Helix 92	92	H	198	211	Right-handed alpha
Helix 93	93	H	228	233	Right-handed alpha
Helix 94	94	H	234	236	Right-handed 310
Helix 95	95	H	251	262	Right-handed alpha
Helix 96	96	H	283	296	Right-handed alpha
Helix 97	97	I	7	21	Right-handed alpha
Helix 98	98	I	22	31	Right-handed alpha
Helix 99	99	I	51	55	Right-handed 310
Helix 100	100	I	68	82	Right-handed alpha
Helix 101	101	I	91	101	Right-handed alpha
Helix 102	102	I	133	141	Right-handed alpha
Helix 103	103	I	157	175	Right-handed alpha
Helix 104	104	I	198	211	Right-handed alpha
Helix 105	105	I	228	233	Right-handed alpha
Helix 106	106	I	234	236	Right-handed 310
Helix 107	107	I	251	262	Right-handed alpha
Helix 108	108	I	283	296	Right-handed alpha
Helix 109	109	J	7	21	Right-handed alpha
Helix 110	110	J	21	31	Right-handed alpha
Helix 111	111	J	51	55	Right-handed 310
Helix 112	112	J	68	82	Right-handed alpha
Helix 113	113	J	91	101	Right-handed alpha
Helix 114	114	J	133	141	Right-handed alpha
Helix 115	115	J	157	175	Right-handed alpha
Helix 116	116	J	198	211	Right-handed alpha
Helix 117	117	J	228	233	Right-handed alpha
Helix 118	118	J	234	236	Right-handed 310
Helix 119	119	J	251	262	Right-handed alpha
Helix 120	120	J	283	296	Right-handed alpha

There are 10 sheets in PDB entry 3FOK. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	192	195	first strand
Strand 2	A	179	189	anti-parallel
Strand 3	A	219	224	parallel
Strand 4	A	240	243	parallel
Strand 5	A	267	272	parallel
Strand 6	A	44	48	parallel
Strand 7	A	87	90	parallel
Strand 8	A	108	112	parallel
Strand 9	A	144	151	parallel
Strand 10	A	179	189	parallel

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There are 10 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	192	195	first strand
Strand 2	B	179	189	anti-parallel
Strand 3	B	219	224	parallel
Strand 4	B	240	243	parallel
Strand 5	B	267	272	parallel
Strand 6	B	44	48	parallel
Strand 7	B	87	90	parallel
Strand 8	B	108	112	parallel
Strand 9	B	144	151	parallel
Strand 10	B	179	189	parallel

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There are 10 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	192	195	first strand
Strand 2	C	179	189	anti-parallel
Strand 3	C	219	224	parallel
Strand 4	C	240	243	parallel
Strand 5	C	267	272	parallel
Strand 6	C	44	48	parallel
Strand 7	C	87	90	parallel
Strand 8	C	108	112	parallel
Strand 9	C	144	151	parallel
Strand 10	C	179	189	parallel

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There are 10 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	192	195	first strand
Strand 2	D	179	189	anti-parallel
Strand 3	D	219	224	parallel
Strand 4	D	240	243	parallel
Strand 5	D	267	272	parallel
Strand 6	D	44	48	parallel
Strand 7	D	87	90	parallel
Strand 8	D	108	112	parallel
Strand 9	D	144	151	parallel
Strand 10	D	179	189	parallel

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There are 10 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	192	195	first strand
Strand 2	E	179	189	anti-parallel
Strand 3	E	219	224	parallel
Strand 4	E	240	243	parallel
Strand 5	E	267	272	parallel
Strand 6	E	44	48	parallel
Strand 7	E	87	90	parallel
Strand 8	E	108	112	parallel
Strand 9	E	144	151	parallel
Strand 10	E	179	189	parallel

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There are 10 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	192	195	first strand
Strand 2	F	179	189	anti-parallel
Strand 3	F	219	224	parallel
Strand 4	F	240	243	parallel
Strand 5	F	267	272	parallel
Strand 6	F	44	48	parallel
Strand 7	F	87	90	parallel
Strand 8	F	108	112	parallel
Strand 9	F	144	151	parallel
Strand 10	F	179	189	parallel

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There are 10 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	192	195	first strand
Strand 2	G	179	189	anti-parallel
Strand 3	G	219	224	parallel
Strand 4	G	240	243	parallel
Strand 5	G	267	272	parallel
Strand 6	G	44	48	parallel
Strand 7	G	87	90	parallel
Strand 8	G	108	112	parallel
Strand 9	G	144	151	parallel
Strand 10	G	179	189	parallel

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There are 10 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	192	195	first strand
Strand 2	H	179	189	anti-parallel
Strand 3	H	219	224	parallel
Strand 4	H	240	243	parallel
Strand 5	H	267	272	parallel
Strand 6	H	44	48	parallel
Strand 7	H	87	90	parallel
Strand 8	H	108	112	parallel
Strand 9	H	144	151	parallel
Strand 10	H	179	189	parallel

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There are 10 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	192	195	first strand
Strand 2	I	179	189	anti-parallel
Strand 3	I	219	224	parallel
Strand 4	I	240	243	parallel
Strand 5	I	267	272	parallel
Strand 6	I	44	48	parallel
Strand 7	I	87	90	parallel
Strand 8	I	108	112	parallel
Strand 9	I	144	151	parallel
Strand 10	I	179	189	parallel

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There are 10 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	192	195	first strand
Strand 2	J	179	189	anti-parallel
Strand 3	J	219	224	parallel
Strand 4	J	240	243	parallel
Strand 5	J	267	272	parallel
Strand 6	J	44	48	parallel
Strand 7	J	87	90	parallel
Strand 8	J	108	112	parallel
Strand 9	J	144	151	parallel
Strand 10	J	179	189	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3FOK

Analysis of interatomic Contacts of Structural Units in PDB entry:
3FOK