Analysis of interatomic Contacts of Structural Units in PDB entry:
3FOQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3FOQ entry

There is 1 chain in PDB entry 3FOQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 473
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 3FOQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
25 28Right-handed 310
Helix 2
2
A
36 48Right-handed alpha
Helix 3
3
A
69 75Right-handed alpha
Helix 4
4
A
88 98Right-handed alpha
Helix 5
5
A
119 133Right-handed alpha
Helix 6
6
A
189 197Right-handed alpha
Helix 7
7
A
210 221Right-handed alpha
Helix 8
8
A
240 263Right-handed alpha
Helix 9
9
A
460 465Right-handed alpha
Helix 10
10
A
467 471Right-handed 310
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There are 8 sheets in PDB entry 3FOQ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
79 82first strand
Strand 2
A
51 56parallel
Strand 3
A
7 13parallel
Strand 4
A
107 112parallel
Strand 5
A
180 188anti-parallel
Strand 6
A
137 142anti-parallel
Strand 7
A
224 228parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 31first strand
Strand 2
A
34 35anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
153 155first strand
Strand 2
A
161 164anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
264 266first strand
Strand 2
A
284 286parallel
Strand 3
A
303 304parallel
Strand 4
A
320 321parallel
Strand 5
A
336 337parallel
Strand 6
A
354 355parallel
Strand 7
A
371 372parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
273 274first strand
Strand 2
A
291 293parallel
Strand 3
A
309 311parallel
Strand 4
A
324 327parallel
Strand 5
A
341 344parallel
Strand 6
A
359 362parallel
Strand 7
A
376 379parallel
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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
297 298first strand
Strand 2
A
314 315parallel
Strand 3
A
329 331parallel
Strand 4
A
347 349parallel
Strand 5
A
365 366parallel
Strand 6
A
381 383parallel
Strand 7
A
406 408parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
394 396first strand
Strand 2
A
419 421parallel
Strand 3
A
437 438parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
431 432first strand
Strand 2
A
447 448parallel
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