Analysis of interatomic Contacts of Structural Units in PDB entry:
3FPC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3FPC entry

There are 4 chains in PDB entry 3FPC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 352
B
 MET 1ALA 352
C
 MET 1ALA 352
D
 MET 1THR 231
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 60 helices in PDB entry 3FPC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
37 46Right-handed alpha
Helix 2
2
A
92 97Right-handed alpha
Helix 3
3
A
99 103Right-handed 310
Helix 4
4
A
128 133Right-handed alpha
Helix 5
5
A
141 146Right-handed alpha
Helix 6
6
A
150 162Right-handed alpha
Helix 7
7
A
176 188Right-handed alpha
Helix 8
8
A
200 211Right-handed alpha
Helix 9
9
A
217 221Right-handed 310
Helix 10
10
A
222 231Right-handed alpha
Helix 11
11
A
247 255Right-handed alpha
Helix 12
12
A
281 285Right-handed 310
Helix 13
13
A
297 311Right-handed alpha
Helix 14
14
A
315 318Right-handed 310
Helix 15
15
A
328 339Right-handed alpha
Helix 16
16
B
37 46Right-handed alpha
Helix 17
17
B
92 97Right-handed alpha
Helix 18
18
B
99 103Right-handed 310
Helix 19
19
B
128 133Right-handed alpha
Helix 20
20
B
141 146Right-handed alpha
Helix 21
21
B
150 162Right-handed alpha
Helix 22
22
B
176 188Right-handed alpha
Helix 23
23
B
200 211Right-handed alpha
Helix 24
24
B
217 221Right-handed 310
Helix 25
25
B
222 231Right-handed alpha
Helix 26
26
B
247 255Right-handed alpha
Helix 27
27
B
281 285Right-handed 310
Helix 28
28
B
297 311Right-handed alpha
Helix 29
29
B
315 318Right-handed 310
Helix 30
30
B
329 339Right-handed alpha
Helix 31
31
C
37 46Right-handed alpha
Helix 32
32
C
92 97Right-handed alpha
Helix 33
33
C
99 103Right-handed 310
Helix 34
34
C
128 133Right-handed alpha
Helix 35
35
C
141 146Right-handed alpha
Helix 36
36
C
150 162Right-handed alpha
Helix 37
37
C
176 189Right-handed alpha
Helix 38
38
C
200 210Right-handed alpha
Helix 39
39
C
217 221Right-handed 310
Helix 40
40
C
222 231Right-handed alpha
Helix 41
41
C
247 255Right-handed alpha
Helix 42
42
C
281 285Right-handed 310
Helix 43
43
C
297 311Right-handed alpha
Helix 44
44
C
315 318Right-handed 310
Helix 45
45
C
329 340Right-handed alpha
Helix 46
46
D
37 46Right-handed alpha
Helix 47
47
D
92 97Right-handed alpha
Helix 48
48
D
99 103Right-handed 310
Helix 49
49
D
128 133Right-handed alpha
Helix 50
50
D
141 146Right-handed alpha
Helix 51
51
D
150 162Right-handed alpha
Helix 52
52
D
176 189Right-handed alpha
Helix 53
53
D
200 211Right-handed alpha
Helix 54
54
D
217 221Right-handed 310
Helix 55
55
D
222 231Right-handed alpha
Helix 56
56
D
247 255Right-handed alpha
Helix 57
57
D
281 285Right-handed 310
Helix 58
58
D
297 311Right-handed alpha
Helix 59
59
D
315 318Right-handed 310
Helix 60
60
D
329 339Right-handed alpha
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There are 18 sheets in PDB entry 3FPC. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 16first strand
Strand 2
A
2 8anti-parallel
Strand 3
A
55 56anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 126first strand
Strand 2
A
27 35anti-parallel
Strand 3
A
60 68anti-parallel
Strand 4
A
80 83anti-parallel
Strand 5
A
134 135anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 126first strand
Strand 2
A
27 35anti-parallel
Strand 3
A
346 350anti-parallel
Strand 4
A
320 325parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
214 216first strand
Strand 2
A
194 197parallel
Strand 3
A
170 173parallel
Strand 4
A
236 241parallel
Strand 5
A
256 264parallel
Strand 6
A
288 292parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
273 277first strand
Strand 2
C
273 277anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
11 16first strand
Strand 2
B
2 8anti-parallel
Strand 3
B
55 56anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
124 126first strand
Strand 2
B
27 35anti-parallel
Strand 3
B
60 68anti-parallel
Strand 4
B
80 83anti-parallel
Strand 5
B
134 135anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
124 126first strand
Strand 2
B
27 35anti-parallel
Strand 3
B
346 350anti-parallel
Strand 4
B
320 325parallel
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There are 6 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
214 216first strand
Strand 2
B
194 197parallel
Strand 3
B
170 173parallel
Strand 4
B
236 241parallel
Strand 5
B
256 264parallel
Strand 6
B
288 292parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
273 277first strand
Strand 2
D
273 277anti-parallel
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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
11 16first strand
Strand 2
C
2 8anti-parallel
Strand 3
C
55 56anti-parallel
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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
124 126first strand
Strand 2
C
27 35anti-parallel
Strand 3
C
60 68anti-parallel
Strand 4
C
80 83anti-parallel
Strand 5
C
134 135anti-parallel
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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
124 126first strand
Strand 2
C
27 35anti-parallel
Strand 3
C
346 350anti-parallel
Strand 4
C
320 325parallel
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There are 6 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
214 216first strand
Strand 2
C
194 197parallel
Strand 3
C
170 173parallel
Strand 4
C
236 241parallel
Strand 5
C
256 264parallel
Strand 6
C
288 292parallel
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There are 3 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
11 16first strand
Strand 2
D
2 8anti-parallel
Strand 3
D
55 56anti-parallel
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There are 5 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
124 126first strand
Strand 2
D
27 35anti-parallel
Strand 3
D
60 68anti-parallel
Strand 4
D
80 83anti-parallel
Strand 5
D
134 135anti-parallel
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There are 4 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
124 126first strand
Strand 2
D
27 35anti-parallel
Strand 3
D
346 350anti-parallel
Strand 4
D
320 325parallel
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There are 6 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
214 216first strand
Strand 2
D
194 197parallel
Strand 3
D
170 173parallel
Strand 4
D
236 241parallel
Strand 5
D
256 264parallel
Strand 6
D
288 292parallel
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