Analysis of interatomic Contacts of Structural Units in PDB entry:
3FPV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3FPV entry

There are 8 chains in PDB entry 3FPV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 16HIS 156
B
 VAL 16HIS 156
C
 VAL 16HIS 156
D
 VAL 16HIS 156
E
 VAL 16HIS 156
F
 VAL 16HIS 156
G
 VAL 16HIS 156
H
 VAL 16HIS 156
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 3FPV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
19 21Right-handed 310
Helix 2
2
A
30 48Right-handed alpha
Helix 3
3
A
75 91Right-handed alpha
Helix 4
4
A
93 99Right-handed alpha
Helix 5
5
A
100 102Right-handed 310
Helix 6
6
A
104 110Right-handed 310
Helix 7
7
A
139 153Right-handed alpha
Helix 8
8
B
19 21Right-handed 310
Helix 9
9
B
30 48Right-handed alpha
Helix 10
10
B
75 91Right-handed alpha
Helix 11
11
B
93 99Right-handed alpha
Helix 12
12
B
100 102Right-handed 310
Helix 13
13
B
104 110Right-handed 310
Helix 14
14
B
139 153Right-handed alpha
Helix 15
15
C
30 47Right-handed alpha
Helix 16
16
C
75 91Right-handed alpha
Helix 17
17
C
93 99Right-handed alpha
Helix 18
18
C
100 103Right-handed 310
Helix 19
19
C
104 110Right-handed 310
Helix 20
20
C
139 152Right-handed alpha
Helix 21
21
D
19 21Right-handed 310
Helix 22
22
D
30 47Right-handed alpha
Helix 23
23
D
75 90Right-handed alpha
Helix 24
24
D
93 98Right-handed alpha
Helix 25
25
D
99 103Right-handed 310
Helix 26
26
D
104 110Right-handed 310
Helix 27
27
D
139 153Right-handed alpha
Helix 28
28
E
30 48Right-handed alpha
Helix 29
29
E
75 91Right-handed alpha
Helix 30
30
E
93 98Right-handed alpha
Helix 31
31
E
99 102Right-handed 310
Helix 32
32
E
104 108Right-handed 310
Helix 33
33
E
139 152Right-handed alpha
Helix 34
34
F
19 21Right-handed 310
Helix 35
35
F
30 48Right-handed alpha
Helix 36
36
F
75 91Right-handed alpha
Helix 37
37
F
93 99Right-handed alpha
Helix 38
38
F
100 102Right-handed 310
Helix 39
39
F
104 110Right-handed 310
Helix 40
40
F
139 152Right-handed alpha
Helix 41
41
G
19 21Right-handed 310
Helix 42
42
G
30 47Right-handed alpha
Helix 43
43
G
75 91Right-handed alpha
Helix 44
44
G
93 99Right-handed alpha
Helix 45
45
G
100 102Right-handed 310
Helix 46
46
G
104 110Right-handed 310
Helix 47
47
G
139 152Right-handed alpha
Helix 48
48
H
19 21Right-handed 310
Helix 49
49
H
30 47Right-handed alpha
Helix 50
50
H
75 91Right-handed alpha
Helix 51
51
H
93 99Right-handed alpha
Helix 52
52
H
100 103Right-handed 310
Helix 53
53
H
104 110Right-handed 310
Helix 54
54
H
139 152Right-handed alpha
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There are 8 sheets in PDB entry 3FPV. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 29first strand
Strand 2
F
23 29anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
119 124first strand
Strand 2
A
127 135anti-parallel
Strand 3
A
53 58anti-parallel
Strand 4
A
63 68anti-parallel
Strand 5
B
63 68anti-parallel
Strand 6
B
53 58anti-parallel
Strand 7
B
127 135anti-parallel
Strand 8
B
119 124anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
23 29first strand
Strand 2
G
23 29anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
23 29first strand
Strand 2
H
23 29anti-parallel
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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
119 124first strand
Strand 2
C
127 135anti-parallel
Strand 3
C
53 58anti-parallel
Strand 4
C
63 68anti-parallel
Strand 5
E
63 68anti-parallel
Strand 6
E
53 58anti-parallel
Strand 7
E
127 135anti-parallel
Strand 8
E
119 124anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
23 29first strand
Strand 2
E
23 29anti-parallel
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There are 8 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
119 124first strand
Strand 2
D
127 135anti-parallel
Strand 3
D
53 58anti-parallel
Strand 4
D
63 68anti-parallel
Strand 5
G
63 68anti-parallel
Strand 6
G
53 58anti-parallel
Strand 7
G
127 135anti-parallel
Strand 8
G
119 124anti-parallel
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There are 8 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
119 124first strand
Strand 2
F
127 135anti-parallel
Strand 3
F
53 58anti-parallel
Strand 4
F
63 68anti-parallel
Strand 5
H
63 68anti-parallel
Strand 6
H
53 58anti-parallel
Strand 7
H
127 135anti-parallel
Strand 8
H
119 124anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il