Analysis of interatomic Contacts of Structural Units in PDB entry:
3FPZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3FPZ entry

There are 4 chains in PDB entry 3FPZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 16CYS 204
A
 MET 206ALA 326
B
 HIS 16CYS 204
B
 MET 206ALA 326
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 3FPZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 20Right-handed 310
Helix 2
2
A
44 63Right-handed alpha
Helix 3
3
A
74 88Right-handed alpha
Helix 4
4
A
122 129Right-handed alpha
Helix 5
5
A
144 158Right-handed alpha
Helix 6
6
A
194 198Right-handed alpha
Helix 7
7
A
243 253Right-handed alpha
Helix 8
8
A
265 277Right-handed alpha
Helix 9
9
A
290 298Right-handed alpha
Helix 10
10
A
306 326Right-handed alpha
Helix 11
11
B
44 63Right-handed alpha
Helix 12
12
B
74 88Right-handed alpha
Helix 13
13
B
109 113Right-handed 310
Helix 14
14
B
122 129Right-handed alpha
Helix 15
15
B
144 158Right-handed alpha
Helix 16
16
B
194 198Right-handed alpha
Helix 17
17
B
243 253Right-handed alpha
Helix 18
18
B
265 277Right-handed alpha
Helix 19
19
B
290 298Right-handed alpha
Helix 20
20
B
306 326Right-handed alpha
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There are 6 sheets in PDB entry 3FPZ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 66first strand
Strand 2
A
209 213parallel
Strand 3
A
185 193anti-parallel
Strand 4
A
168 176anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
162 165first strand
Strand 2
A
93 96parallel
Strand 3
A
68 71parallel
Strand 4
A
230 233parallel
Strand 5
A
286 288parallel
Strand 6
A
278 279anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
116 119first strand
Strand 2
A
139 142anti-parallel
Strand 3
A
134 135anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
65 66first strand
Strand 2
B
209 213parallel
Strand 3
B
186 193anti-parallel
Strand 4
B
168 175anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
162 165first strand
Strand 2
B
93 96parallel
Strand 3
B
68 71parallel
Strand 4
B
230 233parallel
Strand 5
B
286 288parallel
Strand 6
B
278 279anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
116 119first strand
Strand 2
B
139 142anti-parallel
Strand 3
B
134 135anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il