Analysis of interatomic Contacts of Structural Units in PDB entry:
3FQJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3FQJ entry

There is 1 chain in PDB entry 3FQJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 27GLN 384
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 3FQJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
32 36Right-handed 310
Helix 2
2
A
103 112Right-handed alpha
Helix 3
3
A
123 126Right-handed 310
Helix 4
4
A
132 141Right-handed alpha
Helix 5
5
A
142 144Right-handed 310
Helix 6
6
A
167 176Right-handed alpha
Helix 7
7
A
178 195Right-handed alpha
Helix 8
8
A
262 272Right-handed alpha
Helix 9
9
A
272 283Right-handed alpha
Helix 10
10
A
309 315Right-handed 310
Helix 11
11
A
323 342Right-handed alpha
Helix 12
12
A
375 384Right-handed alpha
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There are 4 sheets in PDB entry 3FQJ. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 61first strand
Strand 2
A
47 54anti-parallel
Strand 3
A
215 224anti-parallel
Strand 4
A
227 234anti-parallel
Strand 5
A
128 131parallel
Strand 6
A
159 164parallel
Strand 7
A
149 156anti-parallel
Strand 8
A
349 355anti-parallel
Strand 9
A
362 367anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 70first strand
Strand 2
A
196 197anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
82 83first strand
Strand 2
A
299 307anti-parallel
Strand 3
A
288 294anti-parallel
Strand 4
A
251 258parallel
Strand 5
A
237 238anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 93first strand
Strand 2
A
210 211parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il