Analysis of interatomic Contacts of Structural Units in PDB entry:
3FR8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3FR8 entry

There are 2 chains in PDB entry 3FR8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 81VAL 581
B
 PRO 77ARG 593
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 3FR8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
111 116Right-handed 310
Helix 2
2
A
117 122Right-handed alpha
Helix 3
3
A
135 146Right-handed alpha
Helix 4
4
A
167 173Right-handed alpha
Helix 5
5
A
186 192Right-handed alpha
Helix 6
6
A
201 207Right-handed alpha
Helix 7
7
A
208 216Right-handed alpha
Helix 8
8
A
227 235Right-handed alpha
Helix 9
9
A
254 265Right-handed alpha
Helix 10
10
A
286 298Right-handed alpha
Helix 11
11
A
307 321Right-handed alpha
Helix 12
12
A
324 341Right-handed alpha
Helix 13
13
A
344 358Right-handed alpha
Helix 14
14
A
358 368Right-handed alpha
Helix 15
15
A
368 376Right-handed alpha
Helix 16
16
A
377 408Right-handed alpha
Helix 17
17
A
409 421Right-handed alpha
Helix 18
18
A
439 451Right-handed alpha
Helix 19
19
A
461 482Right-handed alpha
Helix 20
20
A
485 494Right-handed alpha
Helix 21
21
A
494 500Right-handed alpha
Helix 22
22
A
501 509Right-handed alpha
Helix 23
23
A
509 515Right-handed alpha
Helix 24
24
A
518 539Right-handed alpha
Helix 25
25
A
539 547Right-handed alpha
Helix 26
26
A
551 561Right-handed alpha
Helix 27
27
A
562 571Right-handed alpha
Helix 28
28
B
111 116Right-handed 310
Helix 29
29
B
117 122Right-handed alpha
Helix 30
30
B
135 146Right-handed alpha
Helix 31
31
B
170 175Right-handed alpha
Helix 32
32
B
186 192Right-handed alpha
Helix 33
33
B
201 216Right-handed alpha
Helix 34
34
B
227 236Right-handed alpha
Helix 35
35
B
254 261Right-handed alpha
Helix 36
36
B
263 268Right-handed alpha
Helix 37
37
B
286 299Right-handed alpha
Helix 38
38
B
307 321Right-handed alpha
Helix 39
39
B
324 341Right-handed alpha
Helix 40
40
B
344 357Right-handed alpha
Helix 41
41
B
358 367Right-handed alpha
Helix 42
42
B
368 376Right-handed alpha
Helix 43
43
B
377 408Right-handed alpha
Helix 44
44
B
409 421Right-handed alpha
Helix 45
45
B
439 451Right-handed alpha
Helix 46
46
B
461 482Right-handed alpha
Helix 47
47
B
485 494Right-handed alpha
Helix 48
48
B
494 500Right-handed alpha
Helix 49
49
B
501 509Right-handed alpha
Helix 50
50
B
509 515Right-handed alpha
Helix 51
51
B
518 539Right-handed alpha
Helix 52
52
B
539 546Right-handed alpha
Helix 53
53
B
551 560Right-handed alpha
Helix 54
54
B
562 571Right-handed alpha
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There are 2 sheets in PDB entry 3FR8. Click on sheet of interest to get list of strands forming it: A, B,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
96 100first strand
Strand 2
A
103 109anti-parallel
Strand 3
A
302 305anti-parallel
Strand 4
A
275 281parallel
Strand 5
A
245 251anti-parallel
Strand 6
A
221 224parallel
Strand 7
A
195 198parallel
Strand 8
A
127 131parallel
Strand 9
A
156 161parallel
Strand 10
A
183 185parallel
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There are 10 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
96 100first strand
Strand 2
B
103 109anti-parallel
Strand 3
B
302 305anti-parallel
Strand 4
B
275 281parallel
Strand 5
B
245 251anti-parallel
Strand 6
B
221 224parallel
Strand 7
B
195 198parallel
Strand 8
B
127 131parallel
Strand 9
B
156 161parallel
Strand 10
B
183 185parallel
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