Analysis of interatomic Contacts of Structural Units in PDB entry:
3FS2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3FS2 entry

There are 2 chains in PDB entry 3FS2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 3LEU 277
B
 MET 1LEU 277
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 27 helices in PDB entry 3FS2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
32 51Right-handed alpha
Helix 2
2
A
75 91Right-handed alpha
Helix 3
3
A
100 108Right-handed alpha
Helix 4
4
A
117 121Right-handed 310
Helix 5
5
A
123 133Right-handed alpha
Helix 6
6
A
146 148Right-handed 310
Helix 7
7
A
149 159Right-handed alpha
Helix 8
8
A
184 191Right-handed alpha
Helix 9
9
A
200 204Right-handed alpha
Helix 10
10
A
217 219Right-handed 310
Helix 11
11
A
220 232Right-handed alpha
Helix 12
12
A
243 247Right-handed 310
Helix 13
13
A
250 254Right-handed 310
Helix 14
14
A
259 275Right-handed alpha
Helix 15
15
B
32 51Right-handed alpha
Helix 16
16
B
76 91Right-handed alpha
Helix 17
17
B
100 108Right-handed alpha
Helix 18
18
B
117 121Right-handed 310
Helix 19
19
B
123 133Right-handed alpha
Helix 20
20
B
146 148Right-handed 310
Helix 21
21
B
149 159Right-handed alpha
Helix 22
22
B
184 192Right-handed alpha
Helix 23
23
B
200 204Right-handed alpha
Helix 24
24
B
217 219Right-handed 310
Helix 25
25
B
220 232Right-handed alpha
Helix 26
26
B
243 247Right-handed 310
Helix 27
27
B
259 277Right-handed alpha
Back to top of page

There are 6 sheets in PDB entry 3FS2. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 10first strand
Strand 2
A
13 15anti-parallel
Back to list of sheets
Back to top of page

There are 10 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
255 256first strand
Strand 2
A
235 241parallel
Strand 3
A
196 199parallel
Strand 4
A
165 169parallel
Strand 5
A
136 140parallel
Strand 6
A
113 116parallel
Strand 7
A
94 97parallel
Strand 8
A
54 57parallel
Strand 9
A
22 26parallel
Strand 10
A
235 241parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 173first strand
Strand 2
A
179 180anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
7 10first strand
Strand 2
B
13 16anti-parallel
Back to list of sheets
Back to top of page

There are 10 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
255 256first strand
Strand 2
B
235 241parallel
Strand 3
B
196 199parallel
Strand 4
B
165 169parallel
Strand 5
B
136 140parallel
Strand 6
B
113 116parallel
Strand 7
B
94 97parallel
Strand 8
B
54 57parallel
Strand 9
B
22 26parallel
Strand 10
B
235 241parallel
Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
172 173first strand
Strand 2
B
179 180anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il