Analysis of interatomic Contacts of Structural Units in PDB entry:
3FUB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3FUB entry

There are 4 chains in PDB entry 3FUB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 150GLY 348
B
 GLY 40ILE 134
C
 LYS 150GLY 348
D
 ARG 32ILE 134
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 3FUB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
152 163Right-handed alpha
Helix 2
2
A
164 179Right-handed alpha
Helix 3
3
A
188 203Right-handed alpha
Helix 4
4
A
204 214Right-handed alpha
Helix 5
5
A
218 227Right-handed alpha
Helix 6
6
A
230 235Right-handed alpha
Helix 7
7
A
242 252Right-handed alpha
Helix 8
8
A
253 267Right-handed alpha
Helix 9
9
A
278 280Right-handed 310
Helix 10
10
A
281 292Right-handed alpha
Helix 11
11
A
318 320Right-handed 310
Helix 12
12
A
321 334Right-handed alpha
Helix 13
13
A
335 346Right-handed alpha
Helix 14
14
B
51 54Right-handed 310
Helix 15
15
B
77 89Right-handed alpha
Helix 16
16
C
152 163Right-handed alpha
Helix 17
17
C
164 179Right-handed alpha
Helix 18
18
C
188 203Right-handed alpha
Helix 19
19
C
204 213Right-handed alpha
Helix 20
20
C
218 228Right-handed alpha
Helix 21
21
C
230 235Right-handed alpha
Helix 22
22
C
242 253Right-handed alpha
Helix 23
23
C
253 267Right-handed alpha
Helix 24
24
C
278 280Right-handed 310
Helix 25
25
C
281 291Right-handed alpha
Helix 26
26
C
318 320Right-handed 310
Helix 27
27
C
321 334Right-handed alpha
Helix 28
28
C
335 347Right-handed alpha
Helix 29
29
D
51 54Right-handed 310
Helix 30
30
D
77 89Right-handed alpha
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There are 8 sheets in PDB entry 3FUB. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
299 301first strand
Strand 2
A
309 311anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
42 49first strand
Strand 2
B
62 69anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
101 107first strand
Strand 2
B
128 134anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
111 114first strand
Strand 2
B
120 123anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
300 301first strand
Strand 2
C
309 310anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
42 49first strand
Strand 2
D
62 69anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
101 107first strand
Strand 2
D
128 134anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
111 114first strand
Strand 2
D
120 123anti-parallel
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