Analysis of interatomic Contacts of Structural Units in PDB entry:
3FV3

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3FV3 entry

There are 24 chains in PDB entry 3FV3 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 1	VAL 339
I	VAL 502	VAL 503
I	ALA 505	ALA 505
B	ASP 1	VAL 339
J	VAL 502	VAL 503
J	ALA 505	ALA 505
C	ASP 1	VAL 339
K	VAL 502	VAL 503
K	ALA 505	ALA 505
D	ASP 1	VAL 339
L	VAL 502	VAL 503
L	ALA 505	ALA 505
E	ASP 1	VAL 339
M	VAL 502	VAL 503
M	ALA 505	ALA 505
F	ASP 1	VAL 339
N	VAL 502	VAL 503
N	ALA 505	ALA 505
G	ASP 1	VAL 339
O	VAL 502	VAL 503
O	ALA 505	ALA 505
H	ASP 1	VAL 339
P	VAL 502	VAL 503
P	ALA 505	ALA 505

There are 41 helices in PDB entry 3FV3. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	37	A	60	64	Right-handed 310
Helix 2	38	A	122	126	Right-handed 310
Helix 3	39	A	142	150	Right-handed alpha
Helix 4	40	A	229	241	Right-handed alpha
Helix 5	41	A	305	310	Right-handed alpha
Helix 6	1	B	60	64	Right-handed 310
Helix 7	2	B	122	126	Right-handed 310
Helix 8	3	B	142	150	Right-handed alpha
Helix 9	4	B	180	182	Right-handed 310
Helix 10	5	B	229	241	Right-handed alpha
Helix 11	6	B	305	310	Right-handed alpha
Helix 12	7	C	60	64	Right-handed 310
Helix 13	8	C	122	126	Right-handed 310
Helix 14	9	C	142	150	Right-handed alpha
Helix 15	10	C	229	241	Right-handed alpha
Helix 16	11	C	305	310	Right-handed alpha
Helix 17	12	D	60	64	Right-handed 310
Helix 18	13	D	122	126	Right-handed 310
Helix 19	14	D	142	150	Right-handed alpha
Helix 20	15	D	229	241	Right-handed alpha
Helix 21	16	D	305	310	Right-handed alpha
Helix 22	17	E	60	64	Right-handed 310
Helix 23	18	E	122	126	Right-handed 310
Helix 24	19	E	142	150	Right-handed alpha
Helix 25	20	E	229	241	Right-handed alpha
Helix 26	21	E	305	310	Right-handed alpha
Helix 27	22	F	60	64	Right-handed 310
Helix 28	23	F	122	126	Right-handed 310
Helix 29	24	F	142	150	Right-handed alpha
Helix 30	25	F	229	241	Right-handed alpha
Helix 31	26	F	305	310	Right-handed alpha
Helix 32	27	G	60	64	Right-handed 310
Helix 33	28	G	122	126	Right-handed 310
Helix 34	29	G	142	150	Right-handed alpha
Helix 35	30	G	229	241	Right-handed alpha
Helix 36	31	G	305	310	Right-handed alpha
Helix 37	32	H	60	64	Right-handed 310
Helix 38	33	H	122	126	Right-handed 310
Helix 39	34	H	142	150	Right-handed alpha
Helix 40	35	H	229	241	Right-handed alpha
Helix 41	36	H	305	310	Right-handed alpha

There are 44 sheets in PDB entry 3FV3. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN, AO, AP, AQ, AR,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	68	77	first strand
Strand 2	B	83	95	anti-parallel
Strand 3	B	14	20	anti-parallel
Strand 4	B	3	9	anti-parallel
Strand 5	B	169	174	anti-parallel
Strand 6	B	157	161	anti-parallel
Strand 7	B	312	317	anti-parallel
Strand 8	B	322	327	anti-parallel
Strand 9	B	187	190	anti-parallel

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There are 13 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	68	77	first strand
Strand 2	B	83	95	anti-parallel
Strand 3	B	98	111	anti-parallel
Strand 4	B	38	47	parallel
Strand 5	B	117	119	anti-parallel
Strand 6	B	25	32	parallel
Strand 7	B	14	20	anti-parallel
Strand 8	B	3	9	anti-parallel
Strand 9	B	169	174	anti-parallel
Strand 10	B	157	161	anti-parallel
Strand 11	B	312	317	anti-parallel
Strand 12	B	322	327	anti-parallel
Strand 13	B	187	190	anti-parallel

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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	176	178	first strand
Strand 2	B	334	338	anti-parallel
Strand 3	G	335	338	parallel
Strand 4	G	176	178	anti-parallel

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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	209	212	first strand
Strand 2	B	198	206	anti-parallel
Strand 3	B	265	270	anti-parallel
Strand 4	B	275	279	anti-parallel

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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	209	212	first strand
Strand 2	B	198	206	anti-parallel
Strand 3	B	216	219	anti-parallel
Strand 4	B	303	304	parallel
Strand 5	B	226	228	anti-parallel
Strand 6	B	296	298	parallel

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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	243	248	first strand
Strand 2	B	251	256	anti-parallel
Strand 3	B	292	294	anti-parallel
Strand 4	B	284	286	anti-parallel

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There are 9 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	68	77	first strand
Strand 2	C	83	95	anti-parallel
Strand 3	C	14	20	anti-parallel
Strand 4	C	3	9	anti-parallel
Strand 5	C	169	174	anti-parallel
Strand 6	C	157	161	anti-parallel
Strand 7	C	312	317	anti-parallel
Strand 8	C	322	327	anti-parallel
Strand 9	C	187	190	anti-parallel

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There are 13 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	68	77	first strand
Strand 2	C	83	95	anti-parallel
Strand 3	C	98	111	anti-parallel
Strand 4	C	38	47	parallel
Strand 5	C	117	119	anti-parallel
Strand 6	C	25	32	parallel
Strand 7	C	14	20	anti-parallel
Strand 8	C	3	9	anti-parallel
Strand 9	C	169	174	anti-parallel
Strand 10	C	157	161	anti-parallel
Strand 11	C	312	317	anti-parallel
Strand 12	C	322	327	anti-parallel
Strand 13	C	187	190	anti-parallel

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	176	178	first strand
Strand 2	C	336	338	anti-parallel

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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	209	212	first strand
Strand 2	C	198	206	anti-parallel
Strand 3	C	265	270	anti-parallel
Strand 4	C	275	279	anti-parallel

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There are 6 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	209	212	first strand
Strand 2	C	198	206	anti-parallel
Strand 3	C	216	219	anti-parallel
Strand 4	C	303	304	parallel
Strand 5	C	226	228	anti-parallel
Strand 6	C	296	298	parallel

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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	243	246	first strand
Strand 2	C	252	256	anti-parallel
Strand 3	C	292	294	anti-parallel
Strand 4	C	284	286	anti-parallel

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There are 9 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	68	77	first strand
Strand 2	D	83	95	anti-parallel
Strand 3	D	14	20	anti-parallel
Strand 4	D	3	9	anti-parallel
Strand 5	D	169	174	anti-parallel
Strand 6	D	157	161	anti-parallel
Strand 7	D	312	317	anti-parallel
Strand 8	D	322	327	anti-parallel
Strand 9	D	187	190	anti-parallel

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There are 13 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	68	77	first strand
Strand 2	D	83	95	anti-parallel
Strand 3	D	98	111	anti-parallel
Strand 4	D	38	47	parallel
Strand 5	D	117	119	anti-parallel
Strand 6	D	25	32	parallel
Strand 7	D	14	20	anti-parallel
Strand 8	D	3	9	anti-parallel
Strand 9	D	169	174	anti-parallel
Strand 10	D	157	161	anti-parallel
Strand 11	D	312	317	anti-parallel
Strand 12	D	322	327	anti-parallel
Strand 13	D	187	190	anti-parallel

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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	176	178	first strand
Strand 2	D	336	338	anti-parallel

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There are 7 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	275	279	first strand
Strand 2	D	265	270	anti-parallel
Strand 3	D	198	206	anti-parallel
Strand 4	D	209	219	anti-parallel
Strand 5	D	303	304	parallel
Strand 6	D	226	228	anti-parallel
Strand 7	D	296	298	parallel

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There are 4 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	243	246	first strand
Strand 2	D	252	256	anti-parallel
Strand 3	D	292	294	anti-parallel
Strand 4	D	284	286	anti-parallel

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There are 9 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	68	77	first strand
Strand 2	E	83	95	anti-parallel
Strand 3	E	14	20	anti-parallel
Strand 4	E	3	9	anti-parallel
Strand 5	E	169	174	anti-parallel
Strand 6	E	157	161	anti-parallel
Strand 7	E	312	317	anti-parallel
Strand 8	E	322	327	anti-parallel
Strand 9	E	187	190	anti-parallel

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There are 13 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	68	77	first strand
Strand 2	E	83	95	anti-parallel
Strand 3	E	98	111	anti-parallel
Strand 4	E	38	47	parallel
Strand 5	E	117	119	anti-parallel
Strand 6	E	25	32	parallel
Strand 7	E	14	20	anti-parallel
Strand 8	E	3	9	anti-parallel
Strand 9	E	169	174	anti-parallel
Strand 10	E	157	161	anti-parallel
Strand 11	E	312	317	anti-parallel
Strand 12	E	322	327	anti-parallel
Strand 13	E	187	190	anti-parallel

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There are 4 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	176	178	first strand
Strand 2	E	334	338	anti-parallel
Strand 3	F	335	338	parallel
Strand 4	F	176	178	anti-parallel

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There are 7 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	275	279	first strand
Strand 2	E	265	270	anti-parallel
Strand 3	E	198	206	anti-parallel
Strand 4	E	209	219	anti-parallel
Strand 5	E	303	304	parallel
Strand 6	E	226	228	anti-parallel
Strand 7	E	296	298	parallel

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There are 2 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	243	248	first strand
Strand 2	E	251	255	anti-parallel

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There are 2 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	284	286	first strand
Strand 2	E	292	294	anti-parallel

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There are 9 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	68	77	first strand
Strand 2	F	83	95	anti-parallel
Strand 3	F	14	20	anti-parallel
Strand 4	F	3	9	anti-parallel
Strand 5	F	169	174	anti-parallel
Strand 6	F	157	161	anti-parallel
Strand 7	F	312	317	anti-parallel
Strand 8	F	322	327	anti-parallel
Strand 9	F	187	190	anti-parallel

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There are 13 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	68	77	first strand
Strand 2	F	83	95	anti-parallel
Strand 3	F	98	111	anti-parallel
Strand 4	F	38	47	parallel
Strand 5	F	117	119	anti-parallel
Strand 6	F	25	32	parallel
Strand 7	F	14	20	anti-parallel
Strand 8	F	3	9	anti-parallel
Strand 9	F	169	174	anti-parallel
Strand 10	F	157	161	anti-parallel
Strand 11	F	312	317	anti-parallel
Strand 12	F	322	327	anti-parallel
Strand 13	F	187	190	anti-parallel

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There are 4 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	209	212	first strand
Strand 2	F	198	206	anti-parallel
Strand 3	F	265	270	anti-parallel
Strand 4	F	275	279	anti-parallel

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There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	209	212	first strand
Strand 2	F	198	206	anti-parallel
Strand 3	F	216	219	anti-parallel
Strand 4	F	303	304	parallel
Strand 5	F	226	228	anti-parallel
Strand 6	F	296	298	parallel

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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	243	246	first strand
Strand 2	F	252	256	anti-parallel
Strand 3	F	292	294	anti-parallel
Strand 4	F	284	286	anti-parallel

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There are 9 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	68	77	first strand
Strand 2	G	83	95	anti-parallel
Strand 3	G	14	20	anti-parallel
Strand 4	G	3	9	anti-parallel
Strand 5	G	169	174	anti-parallel
Strand 6	G	157	161	anti-parallel
Strand 7	G	312	317	anti-parallel
Strand 8	G	322	327	anti-parallel
Strand 9	G	187	190	anti-parallel

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There are 13 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	68	77	first strand
Strand 2	G	83	95	anti-parallel
Strand 3	G	98	111	anti-parallel
Strand 4	G	38	47	parallel
Strand 5	G	117	119	anti-parallel
Strand 6	G	25	32	parallel
Strand 7	G	14	20	anti-parallel
Strand 8	G	3	9	anti-parallel
Strand 9	G	169	174	anti-parallel
Strand 10	G	157	161	anti-parallel
Strand 11	G	312	317	anti-parallel
Strand 12	G	322	327	anti-parallel
Strand 13	G	187	190	anti-parallel

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There are 7 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	275	279	first strand
Strand 2	G	265	270	anti-parallel
Strand 3	G	198	206	anti-parallel
Strand 4	G	209	219	anti-parallel
Strand 5	G	303	304	parallel
Strand 6	G	226	228	anti-parallel
Strand 7	G	296	298	parallel

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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	243	248	first strand
Strand 2	G	251	255	anti-parallel

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There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	284	286	first strand
Strand 2	G	292	294	anti-parallel

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There are 9 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	68	77	first strand
Strand 2	H	83	95	anti-parallel
Strand 3	H	14	20	anti-parallel
Strand 4	H	3	9	anti-parallel
Strand 5	H	169	174	anti-parallel
Strand 6	H	157	161	anti-parallel
Strand 7	H	312	317	anti-parallel
Strand 8	H	322	327	anti-parallel
Strand 9	H	187	190	anti-parallel

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There are 13 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	68	77	first strand
Strand 2	H	83	95	anti-parallel
Strand 3	H	98	111	anti-parallel
Strand 4	H	38	47	parallel
Strand 5	H	117	119	anti-parallel
Strand 6	H	25	32	parallel
Strand 7	H	14	20	anti-parallel
Strand 8	H	3	9	anti-parallel
Strand 9	H	169	174	anti-parallel
Strand 10	H	157	161	anti-parallel
Strand 11	H	312	317	anti-parallel
Strand 12	H	322	327	anti-parallel
Strand 13	H	187	190	anti-parallel

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There are 2 strands in AJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	176	178	first strand
Strand 2	H	336	338	anti-parallel

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There are 7 strands in AK sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	275	279	first strand
Strand 2	H	265	270	anti-parallel
Strand 3	H	198	206	anti-parallel
Strand 4	H	209	219	anti-parallel
Strand 5	H	303	304	parallel
Strand 6	H	226	228	anti-parallel
Strand 7	H	296	298	parallel

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There are 2 strands in AL sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	243	248	first strand
Strand 2	H	251	255	anti-parallel

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There are 2 strands in AM sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	284	286	first strand
Strand 2	H	292	294	anti-parallel

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There are 9 strands in AN sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	68	77	first strand
Strand 2	A	83	95	anti-parallel
Strand 3	A	14	20	anti-parallel
Strand 4	A	3	9	anti-parallel
Strand 5	A	169	174	anti-parallel
Strand 6	A	157	161	anti-parallel
Strand 7	A	312	317	anti-parallel
Strand 8	A	322	327	anti-parallel
Strand 9	A	187	190	anti-parallel

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There are 13 strands in AO sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	68	77	first strand
Strand 2	A	83	95	anti-parallel
Strand 3	A	98	111	anti-parallel
Strand 4	A	38	47	parallel
Strand 5	A	117	119	anti-parallel
Strand 6	A	25	32	parallel
Strand 7	A	14	20	anti-parallel
Strand 8	A	3	9	anti-parallel
Strand 9	A	169	174	anti-parallel
Strand 10	A	157	161	anti-parallel
Strand 11	A	312	317	anti-parallel
Strand 12	A	322	327	anti-parallel
Strand 13	A	187	190	anti-parallel

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There are 2 strands in AP sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	176	178	first strand
Strand 2	A	336	338	anti-parallel

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There are 7 strands in AQ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	275	279	first strand
Strand 2	A	265	270	anti-parallel
Strand 3	A	198	206	anti-parallel
Strand 4	A	210	219	anti-parallel
Strand 5	A	303	304	parallel
Strand 6	A	226	228	anti-parallel
Strand 7	A	296	298	parallel

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There are 4 strands in AR sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	243	248	first strand
Strand 2	A	251	256	anti-parallel
Strand 3	A	292	294	anti-parallel
Strand 4	A	284	286	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3FV3

Analysis of interatomic Contacts of Structural Units in PDB entry:
3FV3