Analysis of interatomic Contacts of Structural Units in PDB entry:
3FVC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3FVC entry

There is 1 chain in PDB entry 3FVC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 42ASP 679
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 10 helices in PDB entry 3FVC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
128 136Right-handed alpha
Helix 2
2
A
159 161Right-handed 310
Helix 3
3
A
261 265Right-handed 310
Helix 4
4
A
290 294Right-handed 310
Helix 5
5
A
340 342Right-handed 310
Helix 6
6
A
343 357Right-handed alpha
Helix 7
7
A
457 499Right-handed alpha
Helix 8
8
A
501 511Right-handed alpha
Helix 9
9
A
645 651Right-handed alpha
Helix 10
10
A
656 674Right-handed alpha
Back to top of page

There are 9 sheets in PDB entry 3FVC. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
529 530first strand
Strand 2
A
49 50anti-parallel
Strand 3
A
577 579parallel
Strand 4
A
567 572anti-parallel
Strand 5
A
556 560anti-parallel
Strand 6
A
536 538anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 60first strand
Strand 2
A
522 525anti-parallel
Strand 3
A
516 519anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
324 328first strand
Strand 2
A
315 319anti-parallel
Strand 3
A
297 310anti-parallel
Strand 4
A
77 87anti-parallel
Strand 5
A
379 387anti-parallel
Strand 6
A
362 364anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
324 328first strand
Strand 2
A
315 319anti-parallel
Strand 3
A
297 310anti-parallel
Strand 4
A
77 87anti-parallel
Strand 5
A
379 387anti-parallel
Strand 6
A
370 373anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
115 125first strand
Strand 2
A
92 110anti-parallel
Strand 3
A
197 215anti-parallel
Strand 4
A
222 224anti-parallel
Strand 5
A
229 230anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
169 170first strand
Strand 2
A
179 182anti-parallel
Strand 3
A
197 215anti-parallel
Strand 4
A
92 110anti-parallel
Strand 5
A
283 287anti-parallel
Strand 6
A
272 278anti-parallel
Strand 7
A
251 257anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
140 142first strand
Strand 2
A
165 167anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
144 149first strand
Strand 2
A
152 157anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
593 598first strand
Strand 2
A
601 606anti-parallel
Strand 3
A
609 615anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il