Analysis of interatomic Contacts of Structural Units in PDB entry:
3FVE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3FVE entry

There is 1 chain in PDB entry 3FVE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
HIS 0GLY 289
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 3FVE. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
26 35Right-handed alpha
Helix 2
2
A
51 57Right-handed alpha
Helix 3
3
A
90 101Right-handed alpha
Helix 4
4
A
226 241Right-handed alpha
Helix 5
5
A
281 287Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3FVE.

There are 16 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
140 146first strand
Strand 2
A
155 160anti-parallel
Strand 3
A
164 170anti-parallel
Strand 4
A
199 204parallel
Strand 5
A
210 216anti-parallel
Strand 6
A
246 252parallel
Strand 7
A
255 261anti-parallel
Strand 8
A
266 280anti-parallel
Strand 9
A
129 135anti-parallel
Strand 10
A
118 125anti-parallel
Strand 11
A
108 112anti-parallel
Strand 12
A
72 78parallel
Strand 13
A
44 50anti-parallel
Strand 14
A
12 17parallel
Strand 15
A
1 7anti-parallel
Strand 16
A
266 280anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il