Analysis of interatomic Contacts of Structural Units in PDB entry:
3FVV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3FVV entry

There are 2 chains in PDB entry 3FVV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2PHE 224
B
 ARG 4PHE 224
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 3FVV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
19 31Right-handed alpha
Helix 2
2
A
36 53Right-handed alpha
Helix 3
3
A
57 71Right-handed alpha
Helix 4
4
A
73 88Right-handed alpha
Helix 5
5
A
89 93Right-handed 310
Helix 6
6
A
94 107Right-handed alpha
Helix 7
7
A
118 129Right-handed alpha
Helix 8
8
A
157 171Right-handed alpha
Helix 9
9
A
174 178Right-handed 310
Helix 10
10
A
187 189Right-handed 310
Helix 11
11
A
190 197Right-handed alpha
Helix 12
12
A
206 217Right-handed alpha
Helix 13
13
B
19 31Right-handed alpha
Helix 14
14
B
36 53Right-handed alpha
Helix 15
15
B
57 71Right-handed alpha
Helix 16
16
B
73 88Right-handed alpha
Helix 17
17
B
88 93Right-handed alpha
Helix 18
18
B
94 108Right-handed alpha
Helix 19
19
B
118 129Right-handed alpha
Helix 20
20
B
157 171Right-handed alpha
Helix 21
21
B
174 178Right-handed 310
Helix 22
22
B
187 189Right-handed 310
Helix 23
23
B
190 197Right-handed alpha
Helix 24
24
B
206 217Right-handed alpha
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There are 4 sheets in PDB entry 3FVV. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
133 136first strand
Strand 2
A
110 115parallel
Strand 3
A
5 9parallel
Strand 4
A
180 185parallel
Strand 5
A
199 203parallel
Strand 6
A
219 221parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
138 142first strand
Strand 2
A
145 151anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
133 136first strand
Strand 2
B
110 115parallel
Strand 3
B
5 9parallel
Strand 4
B
180 185parallel
Strand 5
B
199 203parallel
Strand 6
B
219 221parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
138 142first strand
Strand 2
B
145 151anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il