Analysis of interatomic Contacts of Structural Units in PDB entry:
3FYG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3FYG entry

There are 28 chains in PDB entry 3FYG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 1GLY 5
A
 TRP 7GLU 21
A
 THR 23SER 26
A
 GLU 28ARG 31
A
 ALA 33ASP 39
A
 ASP 41PRO 60
A
 LEU 62ARG 77
A
 LEU 79LEU 136
A
 SER 138THR 153
A
 VAL 155ALA 159
A
 ASP 161GLN 165
A
 HIS 167ALA 195
A
 MET 197ARG 201
A
 LEU 203LYS 217
B
 PRO 1GLY 5
B
 TRP 7GLU 21
B
 THR 23SER 26
B
 GLU 28ARG 31
B
 ALA 33ASP 39
B
 ASP 41PRO 60
B
 LEU 62ARG 77
B
 LEU 79LEU 136
B
 SER 138THR 153
B
 VAL 155ALA 159
B
 ASP 161GLN 165
B
 HIS 167ALA 195
B
 MET 197ARG 201
B
 LEU 203LYS 217
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 19 helices in PDB entry 3FYG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 20Right-handed 310
Helix 2
2
A
43 48Right-handed alpha
Helix 3
3
A
72 80Right-handed alpha
Helix 4
4
A
90 114Right-handed alpha
Helix 5
5
A
119 139Right-handed alpha
Helix 6
6
A
158 162Right-handed 310
Helix 7
7
A
164 168Right-handed 310
Helix 8
8
A
178 189Right-handed alpha
Helix 9
9
A
191 198Right-handed alpha
Helix 10
10
B
11 20Right-handed 310
Helix 11
11
B
43 46Right-handed alpha
Helix 12
12
B
72 83Right-handed alpha
Helix 13
13
B
90 114Right-handed alpha
Helix 14
14
B
119 125Right-handed alpha
Helix 15
15
B
130 139Right-handed alpha
Helix 16
16
B
158 162Right-handed 310
Helix 17
17
B
164 168Right-handed 310
Helix 18
18
B
178 189Right-handed alpha
Helix 19
19
B
191 198Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 3FYG. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 64first strand
Strand 2
A
67 68anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
63 64first strand
Strand 2
B
67 68anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il