Analysis of interatomic Contacts of Structural Units in PDB entry:
3FZV

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3FZV entry

There are 4 chains in PDB entry 3FZV (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	TYR 4	LYS 300
B	SER 3	LYS 300
C	ALA 2	GLY 299
D	TYR 4	LYS 300

There are 40 helices in PDB entry 3FZV. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	5	18	Right-handed alpha
Helix 2	2	A	20	29	Right-handed alpha
Helix 3	3	A	34	46	Right-handed alpha
Helix 4	4	A	62	85	Right-handed alpha
Helix 5	5	A	105	121	Right-handed alpha
Helix 6	6	A	132	143	Right-handed alpha
Helix 7	7	A	187	192	Right-handed alpha
Helix 8	8	A	203	215	Right-handed alpha
Helix 9	9	A	227	237	Right-handed alpha
Helix 10	10	A	284	300	Right-handed alpha
Helix 11	11	B	5	18	Right-handed alpha
Helix 12	12	B	20	29	Right-handed alpha
Helix 13	13	B	31	47	Right-handed alpha
Helix 14	14	B	62	86	Right-handed alpha
Helix 15	15	B	105	121	Right-handed alpha
Helix 16	16	B	132	143	Right-handed alpha
Helix 17	17	B	187	192	Right-handed alpha
Helix 18	18	B	203	215	Right-handed alpha
Helix 19	19	B	227	237	Right-handed alpha
Helix 20	20	B	284	299	Right-handed alpha
Helix 21	21	C	5	19	Right-handed alpha
Helix 22	22	C	20	28	Right-handed alpha
Helix 23	23	C	31	47	Right-handed alpha
Helix 24	24	C	62	82	Right-handed alpha
Helix 25	25	C	105	121	Right-handed alpha
Helix 26	26	C	132	143	Right-handed alpha
Helix 27	27	C	187	192	Right-handed alpha
Helix 28	28	C	203	215	Right-handed alpha
Helix 29	29	C	227	237	Right-handed alpha
Helix 30	30	C	284	298	Right-handed alpha
Helix 31	31	D	5	18	Right-handed alpha
Helix 32	32	D	22	28	Right-handed alpha
Helix 33	33	D	31	39	Right-handed alpha
Helix 34	34	D	62	82	Right-handed alpha
Helix 35	35	D	105	121	Right-handed alpha
Helix 36	36	D	132	143	Right-handed alpha
Helix 37	37	D	187	192	Right-handed alpha
Helix 38	38	D	203	215	Right-handed alpha
Helix 39	39	D	227	237	Right-handed alpha
Helix 40	40	D	284	299	Right-handed alpha

There are 12 sheets in PDB entry 3FZV. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	124	131	first strand
Strand 2	A	95	102	parallel
Strand 3	A	147	150	parallel
Strand 4	A	274	278	anti-parallel
Strand 5	A	159	163	anti-parallel

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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	185	186	first strand
Strand 2	A	259	264	parallel
Strand 3	A	171	175	anti-parallel
Strand 4	A	242	244	anti-parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	196	199	first strand
Strand 2	A	221	225	parallel

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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	124	131	first strand
Strand 2	B	95	102	parallel
Strand 3	B	147	150	parallel
Strand 4	B	274	278	anti-parallel
Strand 5	B	159	163	anti-parallel

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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	185	186	first strand
Strand 2	B	259	264	parallel
Strand 3	B	171	175	anti-parallel
Strand 4	B	242	244	anti-parallel

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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	196	199	first strand
Strand 2	B	221	225	parallel

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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	124	131	first strand
Strand 2	C	95	102	parallel
Strand 3	C	147	150	parallel
Strand 4	C	274	278	anti-parallel
Strand 5	C	159	163	anti-parallel

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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	185	186	first strand
Strand 2	C	259	264	parallel
Strand 3	C	171	175	anti-parallel
Strand 4	C	242	244	anti-parallel

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	195	199	first strand
Strand 2	C	220	225	parallel

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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	124	131	first strand
Strand 2	D	95	102	parallel
Strand 3	D	147	150	parallel
Strand 4	D	274	278	anti-parallel
Strand 5	D	159	163	anti-parallel

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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	185	186	first strand
Strand 2	D	259	264	parallel
Strand 3	D	171	175	anti-parallel
Strand 4	D	242	244	anti-parallel

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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	195	199	first strand
Strand 2	D	220	225	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3FZV

Analysis of interatomic Contacts of Structural Units in PDB entry:
3FZV