Analysis of interatomic Contacts of Structural Units in PDB entry:
3FZY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3FZY entry

There are 2 chains in PDB entry 3FZY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU -8ASP 3634
B
 GLN -3ASP 3634
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 3FZY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
-8 -1Right-handed alpha
Helix 2
2
A
3438 3442Right-handed 310
Helix 3
3
A
3469 3483Right-handed alpha
Helix 4
4
A
3504 3508Right-handed 310
Helix 5
5
A
3535 3555Right-handed alpha
Helix 6
6
A
3578 3590Right-handed alpha
Helix 7
7
A
3624 3626Right-handed 310
Helix 8
8
B
3438 3442Right-handed 310
Helix 9
9
B
3469 3481Right-handed alpha
Helix 10
10
B
3504 3508Right-handed 310
Helix 11
11
B
3535 3555Right-handed alpha
Helix 12
12
B
3578 3590Right-handed alpha
Helix 13
13
B
3624 3626Right-handed 310
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There are 6 sheets in PDB entry 3FZY. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3498 3502first strand
Strand 2
A
3487 3492anti-parallel
Strand 3
A
3460 3465parallel
Strand 4
A
3512 3517parallel
Strand 5
A
3562 3566parallel
Strand 6
A
3595 3599parallel
Strand 7
A
3628 3631anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3520 3521first strand
Strand 2
A
3530 3531anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3603 3605first strand
Strand 2
A
3611 3614anti-parallel
Strand 3
A
3620 3621anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3498 3502first strand
Strand 2
B
3487 3492anti-parallel
Strand 3
B
3460 3465parallel
Strand 4
B
3512 3517parallel
Strand 5
B
3562 3566parallel
Strand 6
B
3595 3599parallel
Strand 7
B
3628 3631anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3520 3521first strand
Strand 2
B
3530 3531anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3603 3605first strand
Strand 2
B
3611 3614anti-parallel
Strand 3
B
3620 3622anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il