Analysis of interatomic Contacts of Structural Units in PDB entry:
3G05


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3G05 entry

There are 2 chains in PDB entry 3G05 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN -3GLY 550
B
 GLN -3GLY 550
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 3G05. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 28Right-handed alpha
Helix 2
2
A
38 42Right-handed 310
Helix 3
3
A
55 66Right-handed alpha
Helix 4
4
A
69 77Right-handed alpha
Helix 5
5
A
100 114Right-handed alpha
Helix 6
6
A
181 190Right-handed alpha
Helix 7
7
A
248 259Right-handed alpha
Helix 8
8
A
279 285Right-handed alpha
Helix 9
9
A
317 327Right-handed alpha
Helix 10
10
A
350 353Right-handed 310
Helix 11
11
A
369 373Right-handed 310
Helix 12
12
A
377 396Right-handed alpha
Helix 13
13
A
408 417Right-handed alpha
Helix 14
14
A
425 433Right-handed alpha
Helix 15
15
A
443 456Right-handed alpha
Helix 16
16
A
459 479Right-handed alpha
Helix 17
17
A
491 497Right-handed alpha
Helix 18
18
A
509 515Right-handed alpha
Helix 19
19
A
519 524Right-handed alpha
Helix 20
20
A
535 549Right-handed alpha
Helix 21
21
B
15 29Right-handed alpha
Helix 22
22
B
55 66Right-handed alpha
Helix 23
23
B
69 76Right-handed alpha
Helix 24
24
B
89 93Right-handed 310
Helix 25
25
B
100 113Right-handed alpha
Helix 26
26
B
181 190Right-handed alpha
Helix 27
27
B
208 210Right-handed 310
Helix 28
28
B
248 259Right-handed alpha
Helix 29
29
B
317 328Right-handed alpha
Helix 30
30
B
350 353Right-handed 310
Helix 31
31
B
376 395Right-handed alpha
Helix 32
32
B
408 420Right-handed alpha
Helix 33
33
B
425 430Right-handed alpha
Helix 34
34
B
432 437Right-handed alpha
Helix 35
35
B
440 442Right-handed 310
Helix 36
36
B
443 456Right-handed alpha
Helix 37
37
B
459 479Right-handed alpha
Helix 38
38
B
491 496Right-handed alpha
Helix 39
39
B
509 514Right-handed alpha
Helix 40
40
B
519 526Right-handed alpha
Helix 41
41
B
535 548Right-handed alpha
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There are 13 sheets in PDB entry 3G05. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
118 121first strand
Strand 2
A
32 35parallel
Strand 3
A
7 12parallel
Strand 4
A
145 153parallel
Strand 5
A
134 140anti-parallel
Strand 6
A
125 131anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
118 121first strand
Strand 2
A
32 35parallel
Strand 3
A
7 12parallel
Strand 4
A
145 153parallel
Strand 5
A
365 367parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 52first strand
Strand 2
A
94 99anti-parallel
Strand 3
A
78 84anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
163 164first strand
Strand 2
A
341 343anti-parallel
Strand 3
A
200 201anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
194 197first strand
Strand 2
A
345 348anti-parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
216 218first strand
Strand 2
A
242 245anti-parallel
Strand 3
A
295 299anti-parallel
Strand 4
A
306 310anti-parallel
Strand 5
A
204 206anti-parallel
Strand 6
A
336 338anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
484 485first strand
Strand 2
A
507 508anti-parallel
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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
118 120first strand
Strand 2
B
32 35parallel
Strand 3
B
6 12parallel
Strand 4
B
145 153parallel
Strand 5
B
135 140anti-parallel
Strand 6
B
125 130anti-parallel
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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
118 120first strand
Strand 2
B
32 35parallel
Strand 3
B
6 12parallel
Strand 4
B
145 153parallel
Strand 5
B
365 367parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
50 52first strand
Strand 2
B
94 98anti-parallel
Strand 3
B
83 84anti-parallel
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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
162 164first strand
Strand 2
B
342 348anti-parallel
Strand 3
B
194 197anti-parallel
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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
243 246first strand
Strand 2
B
294 299anti-parallel
Strand 3
B
306 310anti-parallel
Strand 4
B
204 206anti-parallel
Strand 5
B
336 338anti-parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
484 485first strand
Strand 2
B
507 508anti-parallel
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