Analysis of interatomic Contacts of Structural Units in PDB entry:
3G0Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3G0Q entry

There are 5 chains in PDB entry 3G0Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 9SER 360
B
 A 1 C 5
B
 G 7 C 11
C
 G 13 C 17
C
 G 19 T 22
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 3G0Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 25Right-handed alpha
Helix 2
2
A
28 32Right-handed 310
Helix 3
3
A
35 46Right-handed alpha
Helix 4
4
A
50 65Right-handed alpha
Helix 5
5
A
67 73Right-handed alpha
Helix 6
6
A
75 84Right-handed alpha
Helix 7
7
A
89 107Right-handed alpha
Helix 8
8
A
113 118Right-handed alpha
Helix 9
9
A
124 137Right-handed alpha
Helix 10
10
A
144 155Right-handed alpha
Helix 11
11
A
165 178Right-handed alpha
Helix 12
12
A
182 197Right-handed alpha
Helix 13
13
A
204 208Right-handed 310
Helix 14
14
A
210 213Right-handed 310
Helix 15
15
A
214 219Right-handed alpha
Helix 16
16
A
221 225Right-handed 310
Helix 17
17
A
280 285Right-handed alpha
Helix 18
18
A
337 342Right-handed 310
Helix 19
19
A
345 359Right-handed alpha
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There are 2 sheets in PDB entry 3G0Q. Click on sheet of interest to get list of strands forming it: A, B,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
270 271first strand
Strand 2
A
235 246anti-parallel
Strand 3
A
310 321parallel
Strand 4
A
305 306anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
266 267first strand
Strand 2
A
250 255anti-parallel
Strand 3
A
331 335anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il