Analysis of interatomic Contacts of Structural Units in PDB entry:
3G0T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3G0T entry

There are 4 chains in PDB entry 3G0T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 0SER 258
A
 ALA 260GLY 436
B
 ASN 2SER 258
B
 ALA 260GLY 436
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 3G0T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 17Right-handed alpha
Helix 2
2
A
21 25Right-handed 310
Helix 3
3
A
26 42Right-handed alpha
Helix 4
4
A
58 72Right-handed alpha
Helix 5
5
A
73 76Right-handed 310
Helix 6
6
A
83 99Right-handed alpha
Helix 7
7
A
103 105Right-handed 310
Helix 8
8
A
111 125Right-handed alpha
Helix 9
9
A
142 153Right-handed alpha
Helix 10
10
A
162 166Right-handed 310
Helix 11
11
A
167 178Right-handed alpha
Helix 12
12
A
199 213Right-handed alpha
Helix 13
13
A
243 247Right-handed 310
Helix 14
14
A
263 267Right-handed 310
Helix 15
15
A
274 280Right-handed alpha
Helix 16
16
A
282 284Right-handed 310
Helix 17
17
A
285 290Right-handed alpha
Helix 18
18
A
293 300Right-handed alpha
Helix 19
19
A
301 308Right-handed alpha
Helix 20
20
A
311 327Right-handed alpha
Helix 21
21
A
331 352Right-handed alpha
Helix 22
22
A
381 392Right-handed alpha
Helix 23
23
A
418 420Right-handed 310
Helix 24
24
A
421 436Right-handed alpha
Helix 25
25
B
6 17Right-handed alpha
Helix 26
26
B
21 25Right-handed 310
Helix 27
27
B
26 42Right-handed alpha
Helix 28
28
B
58 72Right-handed alpha
Helix 29
29
B
73 76Right-handed 310
Helix 30
30
B
83 99Right-handed alpha
Helix 31
31
B
103 105Right-handed 310
Helix 32
32
B
111 125Right-handed alpha
Helix 33
33
B
142 152Right-handed alpha
Helix 34
34
B
162 164Right-handed 310
Helix 35
35
B
165 167Right-handed 310
Helix 36
36
B
168 178Right-handed alpha
Helix 37
37
B
199 214Right-handed alpha
Helix 38
38
B
243 247Right-handed 310
Helix 39
39
B
263 267Right-handed 310
Helix 40
40
B
274 280Right-handed alpha
Helix 41
41
B
282 284Right-handed 310
Helix 42
42
B
285 290Right-handed alpha
Helix 43
43
B
293 300Right-handed alpha
Helix 44
44
B
301 308Right-handed alpha
Helix 45
45
B
311 327Right-handed alpha
Helix 46
46
B
331 353Right-handed alpha
Helix 47
47
B
381 392Right-handed alpha
Helix 48
48
B
418 420Right-handed 310
Helix 49
49
B
421 436Right-handed alpha
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There are 8 sheets in PDB entry 3G0T. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 47first strand
Strand 2
A
394 395parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
107 110first strand
Strand 2
A
269 273anti-parallel
Strand 3
A
251 256anti-parallel
Strand 4
A
216 220parallel
Strand 5
A
184 188parallel
Strand 6
A
135 139parallel
Strand 7
A
157 160parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
355 357first strand
Strand 2
A
372 377anti-parallel
Strand 3
A
410 413anti-parallel
Strand 4
A
397 398anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
361 362first strand
Strand 2
A
365 366anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
46 47first strand
Strand 2
B
394 395parallel
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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
107 110first strand
Strand 2
B
269 273anti-parallel
Strand 3
B
251 256anti-parallel
Strand 4
B
216 220parallel
Strand 5
B
184 188parallel
Strand 6
B
135 139parallel
Strand 7
B
157 160parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
355 357first strand
Strand 2
B
372 377anti-parallel
Strand 3
B
410 413anti-parallel
Strand 4
B
397 398anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
361 362first strand
Strand 2
B
365 366anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il