Analysis of interatomic Contacts of Structural Units in PDB entry:
3G15


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3G15 entry

There are 2 chains in PDB entry 3G15 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 81VAL 457
B
 ARG 88VAL 457
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 3G15. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
84 99Right-handed alpha
Helix 2
2
A
100 104Right-handed 310
Helix 3
3
A
107 111Right-handed 310
Helix 4
4
A
174 190Right-handed alpha
Helix 5
5
A
215 220Right-handed 310
Helix 6
6
A
221 237Right-handed alpha
Helix 7
7
A
247 263Right-handed alpha
Helix 8
8
A
267 279Right-handed alpha
Helix 9
9
A
281 295Right-handed alpha
Helix 10
10
A
308 310Right-handed 310
Helix 11
11
A
317 321Right-handed 310
Helix 12
12
A
339 350Right-handed alpha
Helix 13
13
A
366 369Right-handed 310
Helix 14
14
A
371 387Right-handed alpha
Helix 15
15
A
388 393Right-handed 310
Helix 16
16
A
394 431Right-handed alpha
Helix 17
17
A
436 457Right-handed alpha
Helix 18
18
B
88 99Right-handed alpha
Helix 19
19
B
177 190Right-handed alpha
Helix 20
20
B
215 220Right-handed 310
Helix 21
21
B
221 237Right-handed alpha
Helix 22
22
B
247 261Right-handed alpha
Helix 23
23
B
267 279Right-handed alpha
Helix 24
24
B
281 295Right-handed alpha
Helix 25
25
B
308 310Right-handed 310
Helix 26
26
B
339 350Right-handed alpha
Helix 27
27
B
366 369Right-handed 310
Helix 28
28
B
371 387Right-handed alpha
Helix 29
29
B
389 393Right-handed 310
Helix 30
30
B
394 431Right-handed alpha
Helix 31
31
B
436 456Right-handed alpha
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There are 8 sheets in PDB entry 3G15. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
112 117first strand
Strand 2
A
121 128anti-parallel
Strand 3
A
142 149anti-parallel
Strand 4
A
203 207anti-parallel
Strand 5
A
196 200anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
211 213first strand
Strand 2
A
312 315anti-parallel
Strand 3
A
326 328anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
300 303first strand
Strand 2
A
335 338anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
352 353first strand
Strand 2
A
363 364anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
124 125first strand
Strand 2
B
144 146anti-parallel
Strand 3
B
203 206anti-parallel
Strand 4
B
196 200anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
211 213first strand
Strand 2
B
312 315anti-parallel
Strand 3
B
326 328anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
300 303first strand
Strand 2
B
335 338anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
352 353first strand
Strand 2
B
363 364anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il