Analysis of interatomic Contacts of Structural Units in PDB entry:
3G1F

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3G1F entry

There are 13 chains in PDB entry 3G1F (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 6	LEU 225
B	ASP 10	LEU 225
C	VAL 8	LEU 225
D	VAL 11	LEU 225
E	MET 9	LEU 225
F	MET 9	LEU 225
G	MET 9	LEU 225
H	ASP 10	LEU 225
I	ARG 14	LEU 225
J	VAL 8	LEU 225
K	ASP 10	LEU 225
L	ASP 10	LEU 225
M	MET 9	LEU 225

There are155 helices in PDB entry 3G1F. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	11	13	Right-handed 310
Helix 2	2	A	23	34	Right-handed alpha
Helix 3	3	A	45	52	Right-handed alpha
Helix 4	4	A	53	64	Right-handed alpha
Helix 5	5	A	76	90	Right-handed alpha
Helix 6	6	A	102	117	Right-handed alpha
Helix 7	7	A	128	133	Right-handed 310
Helix 8	8	A	134	149	Right-handed alpha
Helix 9	9	A	160	172	Right-handed alpha
Helix 10	10	A	188	193	Right-handed alpha
Helix 11	11	A	202	207	Right-handed alpha
Helix 12	12	A	210	224	Right-handed alpha
Helix 13	13	B	11	13	Right-handed 310
Helix 14	14	B	23	31	Right-handed alpha
Helix 15	15	B	32	38	Right-handed 310
Helix 16	16	B	45	52	Right-handed alpha
Helix 17	17	B	53	63	Right-handed alpha
Helix 18	18	B	76	90	Right-handed alpha
Helix 19	19	B	102	116	Right-handed alpha
Helix 20	20	B	128	133	Right-handed 310
Helix 21	21	B	134	149	Right-handed alpha
Helix 22	22	B	160	172	Right-handed alpha
Helix 23	23	B	188	193	Right-handed alpha
Helix 24	24	B	202	207	Right-handed alpha
Helix 25	25	B	216	221	Right-handed alpha
Helix 26	26	C	11	13	Right-handed 310
Helix 27	27	C	23	35	Right-handed alpha
Helix 28	28	C	45	52	Right-handed alpha
Helix 29	29	C	54	64	Right-handed alpha
Helix 30	30	C	76	90	Right-handed alpha
Helix 31	31	C	102	117	Right-handed alpha
Helix 32	32	C	128	133	Right-handed 310
Helix 33	33	C	134	149	Right-handed alpha
Helix 34	34	C	160	172	Right-handed alpha
Helix 35	35	C	188	193	Right-handed alpha
Helix 36	36	C	202	207	Right-handed alpha
Helix 37	37	C	210	222	Right-handed alpha
Helix 38	38	D	11	13	Right-handed 310
Helix 39	39	D	23	35	Right-handed alpha
Helix 40	40	D	45	52	Right-handed alpha
Helix 41	41	D	54	64	Right-handed alpha
Helix 42	42	D	76	90	Right-handed alpha
Helix 43	43	D	102	117	Right-handed alpha
Helix 44	44	D	128	133	Right-handed 310
Helix 45	45	D	134	150	Right-handed alpha
Helix 46	46	D	160	172	Right-handed alpha
Helix 47	47	D	188	193	Right-handed alpha
Helix 48	48	D	202	207	Right-handed alpha
Helix 49	49	D	210	221	Right-handed alpha
Helix 50	50	E	11	13	Right-handed 310
Helix 51	51	E	23	33	Right-handed alpha
Helix 52	52	E	44	50	Right-handed alpha
Helix 53	53	E	54	64	Right-handed alpha
Helix 54	54	E	76	90	Right-handed alpha
Helix 55	55	E	102	117	Right-handed alpha
Helix 56	56	E	128	133	Right-handed 310
Helix 57	57	E	134	150	Right-handed alpha
Helix 58	58	E	160	172	Right-handed alpha
Helix 59	59	E	188	193	Right-handed alpha
Helix 60	60	E	210	221	Right-handed alpha
Helix 61	61	F	23	34	Right-handed alpha
Helix 62	62	F	45	52	Right-handed alpha
Helix 63	63	F	53	64	Right-handed alpha
Helix 64	64	F	76	90	Right-handed alpha
Helix 65	65	F	102	117	Right-handed alpha
Helix 66	66	F	128	132	Right-handed 310
Helix 67	67	F	135	137	Right-handed 310
Helix 68	68	F	138	150	Right-handed alpha
Helix 69	69	F	160	172	Right-handed alpha
Helix 70	70	F	210	213	Right-handed 310
Helix 71	71	F	214	219	Right-handed alpha
Helix 72	72	G	11	13	Right-handed 310
Helix 73	73	G	23	33	Right-handed alpha
Helix 74	74	G	45	52	Right-handed alpha
Helix 75	75	G	53	63	Right-handed alpha
Helix 76	76	G	76	90	Right-handed alpha
Helix 77	77	G	102	115	Right-handed alpha
Helix 78	78	G	128	133	Right-handed 310
Helix 79	79	G	135	137	Right-handed 310
Helix 80	80	G	138	150	Right-handed alpha
Helix 81	81	G	160	172	Right-handed alpha
Helix 82	82	G	188	193	Right-handed alpha
Helix 83	83	G	202	207	Right-handed alpha
Helix 84	84	G	210	222	Right-handed alpha
Helix 85	85	H	11	13	Right-handed 310
Helix 86	86	H	23	36	Right-handed alpha
Helix 87	87	H	45	52	Right-handed alpha
Helix 88	88	H	53	64	Right-handed alpha
Helix 89	89	H	76	90	Right-handed alpha
Helix 90	90	H	102	117	Right-handed alpha
Helix 91	91	H	130	149	Right-handed alpha
Helix 92	92	H	160	172	Right-handed alpha
Helix 93	93	H	188	193	Right-handed alpha
Helix 94	94	H	202	207	Right-handed alpha
Helix 95	95	H	210	221	Right-handed alpha
Helix 96	96	I	23	33	Right-handed alpha
Helix 97	97	I	45	52	Right-handed alpha
Helix 98	98	I	54	64	Right-handed alpha
Helix 99	99	I	76	90	Right-handed alpha
Helix 100	100	I	102	117	Right-handed alpha
Helix 101	101	I	128	133	Right-handed 310
Helix 102	102	I	138	150	Right-handed alpha
Helix 103	103	I	160	172	Right-handed alpha
Helix 104	104	I	188	193	Right-handed alpha
Helix 105	105	I	202	207	Right-handed alpha
Helix 106	106	I	210	222	Right-handed alpha
Helix 107	107	J	11	13	Right-handed 310
Helix 108	108	J	23	35	Right-handed alpha
Helix 109	109	J	45	52	Right-handed alpha
Helix 110	110	J	54	64	Right-handed alpha
Helix 111	111	J	76	90	Right-handed alpha
Helix 112	112	J	102	117	Right-handed alpha
Helix 113	113	J	128	133	Right-handed 310
Helix 114	114	J	134	149	Right-handed alpha
Helix 115	115	J	160	172	Right-handed alpha
Helix 116	116	J	188	196	Right-handed alpha
Helix 117	117	J	202	207	Right-handed alpha
Helix 118	118	J	210	221	Right-handed alpha
Helix 119	119	K	11	13	Right-handed 310
Helix 120	120	K	23	35	Right-handed alpha
Helix 121	121	K	45	52	Right-handed alpha
Helix 122	122	K	53	64	Right-handed alpha
Helix 123	123	K	76	90	Right-handed alpha
Helix 124	124	K	103	117	Right-handed alpha
Helix 125	125	K	128	133	Right-handed 310
Helix 126	126	K	138	150	Right-handed alpha
Helix 127	127	K	160	172	Right-handed alpha
Helix 128	128	K	188	194	Right-handed alpha
Helix 129	129	K	202	207	Right-handed alpha
Helix 130	130	K	210	222	Right-handed alpha
Helix 131	131	L	11	13	Right-handed 310
Helix 132	132	L	23	35	Right-handed alpha
Helix 133	133	L	45	52	Right-handed alpha
Helix 134	134	L	54	64	Right-handed alpha
Helix 135	135	L	76	89	Right-handed alpha
Helix 136	136	L	103	117	Right-handed alpha
Helix 137	137	L	128	132	Right-handed 310
Helix 138	138	L	134	139	Right-handed 310
Helix 139	139	L	140	150	Right-handed alpha
Helix 140	140	L	160	171	Right-handed alpha
Helix 141	141	L	188	193	Right-handed alpha
Helix 142	142	L	202	207	Right-handed alpha
Helix 143	143	L	210	221	Right-handed alpha
Helix 144	144	M	11	13	Right-handed 310
Helix 145	145	M	23	34	Right-handed alpha
Helix 146	146	M	45	52	Right-handed alpha
Helix 147	147	M	53	64	Right-handed alpha
Helix 148	148	M	76	90	Right-handed alpha
Helix 149	149	M	102	117	Right-handed alpha
Helix 150	150	M	128	133	Right-handed 310
Helix 151	151	M	134	150	Right-handed alpha
Helix 152	152	M	160	172	Right-handed alpha
Helix 153	153	M	188	193	Right-handed alpha
Helix 154	154	M	202	207	Right-handed alpha
Helix 155	155	M	210	221	Right-handed alpha

There are 13 sheets in PDB entry 3G1F. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	15	19	first strand
Strand 2	A	40	44	parallel
Strand 3	A	66	73	parallel
Strand 4	A	94	98	parallel
Strand 5	A	119	123	parallel
Strand 6	A	153	155	parallel
Strand 7	A	176	179	parallel
Strand 8	A	198	201	parallel
Strand 9	A	15	19	parallel

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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	15	19	first strand
Strand 2	B	40	44	parallel
Strand 3	B	66	73	parallel
Strand 4	B	94	98	parallel
Strand 5	B	119	123	parallel
Strand 6	B	153	155	parallel
Strand 7	B	176	179	parallel
Strand 8	B	198	201	parallel
Strand 9	B	15	19	parallel

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There are 9 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	15	19	first strand
Strand 2	C	40	44	parallel
Strand 3	C	66	73	parallel
Strand 4	C	94	98	parallel
Strand 5	C	119	123	parallel
Strand 6	C	153	155	parallel
Strand 7	C	176	179	parallel
Strand 8	C	198	201	parallel
Strand 9	C	15	19	parallel

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There are 9 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	15	19	first strand
Strand 2	D	40	44	parallel
Strand 3	D	66	73	parallel
Strand 4	D	94	98	parallel
Strand 5	D	119	123	parallel
Strand 6	D	153	155	parallel
Strand 7	D	176	179	parallel
Strand 8	D	198	201	parallel
Strand 9	D	15	19	parallel

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There are 9 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	15	17	first strand
Strand 2	E	40	41	parallel
Strand 3	E	66	73	parallel
Strand 4	E	94	98	parallel
Strand 5	E	119	123	parallel
Strand 6	E	153	155	parallel
Strand 7	E	176	179	parallel
Strand 8	E	198	201	parallel
Strand 9	E	15	17	parallel

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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	18	19	first strand
Strand 2	F	40	44	parallel
Strand 3	F	66	73	parallel
Strand 4	F	94	98	parallel
Strand 5	F	119	123	parallel
Strand 6	F	153	155	parallel
Strand 7	F	176	182	parallel
Strand 8	F	198	201	parallel

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There are 9 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	15	19	first strand
Strand 2	G	40	44	parallel
Strand 3	G	66	73	parallel
Strand 4	G	94	98	parallel
Strand 5	G	119	123	parallel
Strand 6	G	153	155	parallel
Strand 7	G	176	179	parallel
Strand 8	G	198	201	parallel
Strand 9	G	15	19	parallel

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There are 9 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	15	17	first strand
Strand 2	H	40	44	parallel
Strand 3	H	66	73	parallel
Strand 4	H	94	98	parallel
Strand 5	H	119	123	parallel
Strand 6	H	153	155	parallel
Strand 7	H	176	179	parallel
Strand 8	H	198	201	parallel
Strand 9	H	15	17	parallel

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There are 9 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	15	18	first strand
Strand 2	I	40	44	parallel
Strand 3	I	66	73	parallel
Strand 4	I	94	98	parallel
Strand 5	I	119	123	parallel
Strand 6	I	153	155	parallel
Strand 7	I	176	179	parallel
Strand 8	I	198	201	parallel
Strand 9	I	15	18	parallel

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There are 9 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	15	19	first strand
Strand 2	J	40	44	parallel
Strand 3	J	66	73	parallel
Strand 4	J	94	98	parallel
Strand 5	J	119	123	parallel
Strand 6	J	153	155	parallel
Strand 7	J	176	180	parallel
Strand 8	J	198	201	parallel
Strand 9	J	15	19	parallel

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There are 9 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	15	19	first strand
Strand 2	K	40	44	parallel
Strand 3	K	66	73	parallel
Strand 4	K	94	98	parallel
Strand 5	K	119	123	parallel
Strand 6	K	153	155	parallel
Strand 7	K	176	179	parallel
Strand 8	K	198	201	parallel
Strand 9	K	15	19	parallel

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There are 9 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	15	18	first strand
Strand 2	L	40	44	parallel
Strand 3	L	66	73	parallel
Strand 4	L	94	98	parallel
Strand 5	L	121	123	parallel
Strand 6	L	153	155	parallel
Strand 7	L	176	179	parallel
Strand 8	L	198	201	parallel
Strand 9	L	15	18	parallel

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There are 9 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	15	19	first strand
Strand 2	M	40	44	parallel
Strand 3	M	66	73	parallel
Strand 4	M	94	98	parallel
Strand 5	M	119	123	parallel
Strand 6	M	153	155	parallel
Strand 7	M	176	179	parallel
Strand 8	M	198	201	parallel
Strand 9	M	15	19	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3G1F

Analysis of interatomic Contacts of Structural Units in PDB entry:
3G1F