Analysis of interatomic Contacts of Structural Units in PDB entry:
3G1T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3G1T entry

There is 1 chain in PDB entry 3G1T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
TYR 5PRO 247
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 3G1T. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
24 37Right-handed alpha
Helix 2
2
A
47 63Right-handed alpha
Helix 3
3
A
77 92Right-handed alpha
Helix 4
4
A
115 127Right-handed alpha
Helix 5
5
A
127 143Right-handed alpha
Helix 6
6
A
154 158Right-handed 310
Helix 7
7
A
164 186Right-handed alpha
Helix 8
8
A
202 209Right-handed alpha
Helix 9
9
A
213 217Right-handed 310
Helix 10
10
A
223 232Right-handed alpha
Helix 11
11
A
233 236Right-handed 310
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There is 1 sheet ( A) in PDB entry 3G1T.

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
67 70first strand
Strand 2
A
40 45parallel
Strand 3
A
16 19parallel
Strand 4
A
97 99parallel
Strand 5
A
147 152parallel
Strand 6
A
190 196parallel
Strand 7
A
242 244parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il