Analysis of interatomic Contacts of Structural Units in PDB entry:
3G23


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3G23 entry

There are 2 chains in PDB entry 3G23 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 0GLY 271
B
 GLY 0GLY 271
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 27 helices in PDB entry 3G23. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 30Right-handed alpha
Helix 2
2
A
39 43Right-handed 310
Helix 3
3
A
51 64Right-handed alpha
Helix 4
4
A
80 89Right-handed alpha
Helix 5
5
A
90 91Right-handed 310
Helix 6
6
A
92 97Right-handed 310
Helix 7
7
A
103 105Right-handed 310
Helix 8
8
A
106 116Right-handed alpha
Helix 9
9
A
126 132Right-handed 310
Helix 10
10
A
135 147Right-handed alpha
Helix 11
11
A
168 175Right-handed alpha
Helix 12
12
A
196 212Right-handed alpha
Helix 13
13
A
237 250Right-handed alpha
Helix 14
14
B
15 30Right-handed alpha
Helix 15
15
B
39 43Right-handed 310
Helix 16
16
B
51 64Right-handed alpha
Helix 17
17
B
79 82Right-handed 310
Helix 18
18
B
83 89Right-handed alpha
Helix 19
19
B
90 91Right-handed 310
Helix 20
20
B
92 97Right-handed 310
Helix 21
21
B
103 105Right-handed 310
Helix 22
22
B
106 116Right-handed alpha
Helix 23
23
B
126 132Right-handed 310
Helix 24
24
B
134 147Right-handed alpha
Helix 25
25
B
168 175Right-handed alpha
Helix 26
26
B
196 212Right-handed alpha
Helix 27
27
B
237 250Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 3G23. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 37first strand
Strand 2
A
3 8parallel
Strand 3
A
70 73parallel
Strand 4
A
99 102parallel
Strand 5
A
120 123parallel
Strand 6
A
268 269anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
163 167first strand
Strand 2
A
187 193parallel
Strand 3
A
218 225parallel
Strand 4
A
253 256parallel
Back to list of sheets
Back to top of page

There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
33 37first strand
Strand 2
B
3 8parallel
Strand 3
B
70 73parallel
Strand 4
B
99 102parallel
Strand 5
B
120 123parallel
Strand 6
B
268 269anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
163 167first strand
Strand 2
B
187 193parallel
Strand 3
B
218 225parallel
Strand 4
B
253 256parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il