Analysis of interatomic Contacts of Structural Units in PDB entry:
3G33


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3G33 entry

There are 4 chains in PDB entry 3G33 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 10LEU 300
B
 GLY 23SER 254
C
 ARG 10LEU 300
D
 GLY 23SER 254
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 3G33. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
55 72Right-handed alpha
Helix 2
2
A
104 111Right-handed alpha
Helix 3
3
A
118 139Right-handed alpha
Helix 4
4
A
176 181Right-handed 310
Helix 5
5
A
187 193Right-handed alpha
Helix 6
6
A
199 212Right-handed alpha
Helix 7
7
A
223 236Right-handed alpha
Helix 8
8
A
250 254Right-handed 310
Helix 9
9
A
261 266Right-handed alpha
Helix 10
10
A
270 281Right-handed alpha
Helix 11
11
A
290 296Right-handed alpha
Helix 12
12
B
23 35Right-handed alpha
Helix 13
13
B
36 39Right-handed 310
Helix 14
14
B
53 71Right-handed alpha
Helix 15
15
B
76 92Right-handed alpha
Helix 16
16
B
95 97Right-handed 310
Helix 17
17
B
98 115Right-handed alpha
Helix 18
18
B
122 128Right-handed alpha
Helix 19
19
B
133 148Right-handed alpha
Helix 20
20
B
156 159Right-handed 310
Helix 21
21
B
160 167Right-handed alpha
Helix 22
22
B
174 192Right-handed alpha
Helix 23
23
B
193 196Right-handed 310
Helix 24
24
B
199 214Right-handed alpha
Helix 25
25
B
221 234Right-handed alpha
Helix 26
26
B
236 253Right-handed alpha
Helix 27
27
C
55 72Right-handed alpha
Helix 28
28
C
104 111Right-handed alpha
Helix 29
29
C
118 139Right-handed alpha
Helix 30
30
C
166 177Right-handed alpha
Helix 31
31
C
187 192Right-handed alpha
Helix 32
32
C
199 212Right-handed alpha
Helix 33
33
C
223 236Right-handed alpha
Helix 34
34
C
250 254Right-handed 310
Helix 35
35
C
261 266Right-handed alpha
Helix 36
36
C
270 281Right-handed alpha
Helix 37
37
C
290 296Right-handed alpha
Helix 38
38
D
23 35Right-handed alpha
Helix 39
39
D
36 39Right-handed 310
Helix 40
40
D
53 71Right-handed alpha
Helix 41
41
D
76 92Right-handed alpha
Helix 42
42
D
95 97Right-handed 310
Helix 43
43
D
98 115Right-handed alpha
Helix 44
44
D
122 128Right-handed alpha
Helix 45
45
D
133 148Right-handed alpha
Helix 46
46
D
156 159Right-handed 310
Helix 47
47
D
160 167Right-handed alpha
Helix 48
48
D
174 192Right-handed alpha
Helix 49
49
D
193 196Right-handed 310
Helix 50
50
D
199 214Right-handed alpha
Helix 51
51
D
222 234Right-handed alpha
Helix 52
52
D
236 253Right-handed alpha
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There are 4 sheets in PDB entry 3G33. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
12 17first strand
Strand 2
A
25 29anti-parallel
Strand 3
A
36 45anti-parallel
Strand 4
A
91 99anti-parallel
Strand 5
A
79 85anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
151 153first strand
Strand 2
A
159 161anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
12 17first strand
Strand 2
C
25 29anti-parallel
Strand 3
C
36 45anti-parallel
Strand 4
C
91 99anti-parallel
Strand 5
C
79 85anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
151 153first strand
Strand 2
C
159 161anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il