Analysis of interatomic Contacts of Structural Units in PDB entry:
3G3O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3G3O entry

There is 1 chain in PDB entry 3G3O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 202GLN 553
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 3G3O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
211 224Right-handed alpha
Helix 2
2
A
288 297Right-handed alpha
Helix 3
3
A
311 315Right-handed 310
Helix 4
4
A
344 346Right-handed 310
Helix 5
5
A
347 354Right-handed alpha
Helix 6
6
A
357 371Right-handed alpha
Helix 7
7
A
373 394Right-handed alpha
Helix 8
8
A
462 464Right-handed 310
Helix 9
9
A
502 510Right-handed alpha
Helix 10
10
A
521 532Right-handed alpha
Helix 11
11
A
533 535Right-handed 310
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There are 2 sheets in PDB entry 3G3O. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
336 343first strand
Strand 2
A
318 325anti-parallel
Strand 3
A
303 309anti-parallel
Strand 4
A
278 284anti-parallel
Strand 5
A
397 409anti-parallel
Strand 6
A
417 429anti-parallel
Strand 7
A
466 468anti-parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
336 343first strand
Strand 2
A
318 325anti-parallel
Strand 3
A
303 309anti-parallel
Strand 4
A
278 284anti-parallel
Strand 5
A
397 409anti-parallel
Strand 6
A
417 429anti-parallel
Strand 7
A
472 478anti-parallel
Strand 8
A
204 210anti-parallel
Strand 9
A
515 516anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il