Analysis of interatomic Contacts of Structural Units in PDB entry:
3G43


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3G43 entry

There are 6 chains in PDB entry 3G43 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 3LYS 77
B
 ASP 2LYS 148
C
 ALA 1LYS 148
D
 GLN 3LYS 148
E
 GLY 1607ARG 1682
F
 GLY 1607GLN 1651
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 3G43. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 20Right-handed alpha
Helix 2
2
A
28 39Right-handed alpha
Helix 3
3
A
44 56Right-handed alpha
Helix 4
4
A
65 75Right-handed alpha
Helix 5
5
B
5 20Right-handed alpha
Helix 6
6
B
28 38Right-handed alpha
Helix 7
7
B
44 56Right-handed alpha
Helix 8
8
B
65 78Right-handed alpha
Helix 9
9
B
82 93Right-handed alpha
Helix 10
10
B
101 112Right-handed alpha
Helix 11
11
B
117 129Right-handed alpha
Helix 12
12
B
138 146Right-handed alpha
Helix 13
13
C
5 18Right-handed alpha
Helix 14
14
C
28 39Right-handed alpha
Helix 15
15
C
44 56Right-handed alpha
Helix 16
16
C
65 76Right-handed alpha
Helix 17
17
C
81 93Right-handed alpha
Helix 18
18
C
101 112Right-handed alpha
Helix 19
19
C
117 129Right-handed alpha
Helix 20
20
C
138 146Right-handed alpha
Helix 21
21
D
5 20Right-handed alpha
Helix 22
22
D
28 39Right-handed alpha
Helix 23
23
D
44 56Right-handed alpha
Helix 24
24
D
65 76Right-handed alpha
Helix 25
25
D
81 93Right-handed alpha
Helix 26
26
D
101 112Right-handed alpha
Helix 27
27
D
117 129Right-handed alpha
Helix 28
28
D
137 146Right-handed alpha
Helix 29
29
E
1608 1652Right-handed alpha
Helix 30
30
E
1665 1681Right-handed alpha
Helix 31
31
F
1608 1650Right-handed alpha
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There are 6 sheets in PDB entry 3G43. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 27first strand
Strand 2
A
63 64anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
26 27first strand
Strand 2
B
63 64anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
99 100first strand
Strand 2
B
136 137anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
26 27first strand
Strand 2
C
63 64anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
99 100first strand
Strand 2
C
136 137anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
26 27first strand
Strand 2
D
63 64anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il