Analysis of interatomic Contacts of Structural Units in PDB entry:
3G4D


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3G4D entry

There are 2 chains in PDB entry 3G4D (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 25LEU 554
B
 GLN 28LEU 554
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 61 helices in PDB entry 3G4D. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
45 65Right-handed alpha
Helix 2
2
A
69 83Right-handed alpha
Helix 3
3
A
85 88Right-handed 310
Helix 4
4
A
89 103Right-handed alpha
Helix 5
5
A
110 124Right-handed alpha
Helix 6
6
A
129 137Right-handed 310
Helix 7
7
A
144 150Right-handed alpha
Helix 8
8
A
150 162Right-handed alpha
Helix 9
9
A
168 186Right-handed alpha
Helix 10
10
A
192 203Right-handed alpha
Helix 11
11
A
209 223Right-handed alpha
Helix 12
12
A
228 261Right-handed alpha
Helix 13
13
A
261 266Right-handed alpha
Helix 14
14
A
272 284Right-handed alpha
Helix 15
15
A
286 288Right-handed 310
Helix 16
16
A
289 311Right-handed alpha
Helix 17
17
A
315 329Right-handed alpha
Helix 18
18
A
330 337Right-handed 310
Helix 19
19
A
338 340Right-handed 310
Helix 20
20
A
341 360Right-handed alpha
Helix 21
21
A
361 364Right-handed 310
Helix 22
22
A
365 391Right-handed alpha
Helix 23
23
A
396 405Right-handed alpha
Helix 24
24
A
406 408Right-handed 310
Helix 25
25
A
409 420Right-handed alpha
Helix 26
26
A
426 435Right-handed alpha
Helix 27
27
A
437 457Right-handed alpha
Helix 28
28
A
467 477Right-handed alpha
Helix 29
29
A
479 503Right-handed alpha
Helix 30
30
A
509 527Right-handed alpha
Helix 31
31
A
537 549Right-handed alpha
Helix 32
32
B
46 65Right-handed alpha
Helix 33
33
B
69 83Right-handed alpha
Helix 34
34
B
85 88Right-handed 310
Helix 35
35
B
89 101Right-handed alpha
Helix 36
36
B
110 124Right-handed alpha
Helix 37
37
B
129 137Right-handed 310
Helix 38
38
B
150 162Right-handed alpha
Helix 39
39
B
168 187Right-handed alpha
Helix 40
40
B
192 203Right-handed alpha
Helix 41
41
B
209 221Right-handed alpha
Helix 42
42
B
228 261Right-handed alpha
Helix 43
43
B
272 284Right-handed alpha
Helix 44
44
B
286 288Right-handed 310
Helix 45
45
B
289 312Right-handed alpha
Helix 46
46
B
315 329Right-handed alpha
Helix 47
47
B
330 336Right-handed 310
Helix 48
48
B
338 340Right-handed 310
Helix 49
49
B
341 361Right-handed alpha
Helix 50
50
B
362 364Right-handed 310
Helix 51
51
B
365 391Right-handed alpha
Helix 52
52
B
396 405Right-handed alpha
Helix 53
53
B
406 408Right-handed 310
Helix 54
54
B
409 420Right-handed alpha
Helix 55
55
B
426 435Right-handed alpha
Helix 56
56
B
437 457Right-handed alpha
Helix 57
57
B
467 477Right-handed alpha
Helix 58
58
B
479 502Right-handed alpha
Helix 59
59
B
509 527Right-handed alpha
Helix 60
60
B
532 532Right-handed alpha
Helix 61
61
B
537 549Right-handed alpha
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There are no sheets in PDB entry 3G4D
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il