Analysis of interatomic Contacts of Structural Units in PDB entry:
3G5A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3G5A entry

There are 6 chains in PDB entry 3G5A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -3LYS 304
B
 VAL 0LYS 304
C
 VAL 0LYS 304
D
 VAL 0ARG 300
E
 MET 1ARG 300
F
 GLY -3LYS 304
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 72 helices in PDB entry 3G5A. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 20Right-handed alpha
Helix 2
2
A
26 46Right-handed alpha
Helix 3
3
A
64 83Right-handed alpha
Helix 4
4
A
114 128Right-handed alpha
Helix 5
5
A
142 154Right-handed alpha
Helix 6
6
A
197 208Right-handed alpha
Helix 7
7
A
215 219Right-handed 310
Helix 8
8
A
232 236Right-handed 310
Helix 9
9
A
248 254Right-handed alpha
Helix 10
10
A
270 279Right-handed alpha
Helix 11
11
A
286 290Right-handed 310
Helix 12
12
A
292 296Right-handed 310
Helix 13
13
B
2 19Right-handed alpha
Helix 14
14
B
26 44Right-handed alpha
Helix 15
15
B
64 86Right-handed alpha
Helix 16
16
B
114 128Right-handed alpha
Helix 17
17
B
142 154Right-handed alpha
Helix 18
18
B
197 209Right-handed alpha
Helix 19
19
B
213 219Right-handed 310
Helix 20
20
B
232 236Right-handed 310
Helix 21
21
B
248 254Right-handed alpha
Helix 22
22
B
270 279Right-handed alpha
Helix 23
23
B
286 290Right-handed 310
Helix 24
24
B
292 296Right-handed 310
Helix 25
25
C
2 19Right-handed alpha
Helix 26
26
C
26 46Right-handed alpha
Helix 27
27
C
64 83Right-handed alpha
Helix 28
28
C
114 128Right-handed alpha
Helix 29
29
C
142 154Right-handed alpha
Helix 30
30
C
197 208Right-handed alpha
Helix 31
31
C
215 219Right-handed 310
Helix 32
32
C
232 236Right-handed 310
Helix 33
33
C
248 254Right-handed alpha
Helix 34
34
C
270 279Right-handed alpha
Helix 35
35
C
286 290Right-handed 310
Helix 36
36
C
292 296Right-handed 310
Helix 37
37
D
2 19Right-handed alpha
Helix 38
38
D
26 46Right-handed alpha
Helix 39
39
D
64 86Right-handed alpha
Helix 40
40
D
114 129Right-handed alpha
Helix 41
41
D
142 154Right-handed alpha
Helix 42
42
D
197 209Right-handed alpha
Helix 43
43
D
213 218Right-handed alpha
Helix 44
44
D
232 236Right-handed 310
Helix 45
45
D
248 254Right-handed alpha
Helix 46
46
D
270 279Right-handed alpha
Helix 47
47
D
286 290Right-handed 310
Helix 48
48
D
292 296Right-handed 310
Helix 49
49
E
2 19Right-handed alpha
Helix 50
50
E
26 46Right-handed alpha
Helix 51
51
E
64 83Right-handed alpha
Helix 52
52
E
114 128Right-handed alpha
Helix 53
53
E
142 154Right-handed alpha
Helix 54
54
E
197 209Right-handed alpha
Helix 55
55
E
213 218Right-handed alpha
Helix 56
56
E
232 236Right-handed 310
Helix 57
57
E
248 254Right-handed alpha
Helix 58
58
E
270 279Right-handed alpha
Helix 59
59
E
286 290Right-handed 310
Helix 60
60
E
292 296Right-handed 310
Helix 61
61
F
2 19Right-handed alpha
Helix 62
62
F
26 46Right-handed alpha
Helix 63
63
F
64 83Right-handed alpha
Helix 64
64
F
114 128Right-handed alpha
Helix 65
65
F
142 154Right-handed alpha
Helix 66
66
F
197 208Right-handed alpha
Helix 67
67
F
215 219Right-handed 310
Helix 68
68
F
232 236Right-handed 310
Helix 69
69
F
248 254Right-handed alpha
Helix 70
70
F
270 279Right-handed alpha
Helix 71
71
F
286 290Right-handed 310
Helix 72
72
F
292 296Right-handed 310
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There are 6 sheets in PDB entry 3G5A. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 134first strand
Strand 2
A
103 107parallel
Strand 3
A
57 60parallel
Strand 4
A
159 161parallel
Strand 5
A
188 190parallel
Strand 6
A
177 179anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
130 134first strand
Strand 2
B
103 107parallel
Strand 3
B
57 60parallel
Strand 4
B
159 161parallel
Strand 5
B
188 190parallel
Strand 6
B
177 179anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
130 134first strand
Strand 2
C
103 107parallel
Strand 3
C
57 60parallel
Strand 4
C
159 161parallel
Strand 5
C
188 190parallel
Strand 6
C
177 179anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
130 134first strand
Strand 2
D
103 107parallel
Strand 3
D
57 60parallel
Strand 4
D
159 161parallel
Strand 5
D
188 190parallel
Strand 6
D
177 179anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
130 134first strand
Strand 2
E
103 107parallel
Strand 3
E
57 60parallel
Strand 4
E
159 161parallel
Strand 5
E
188 190parallel
Strand 6
E
177 179anti-parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
130 134first strand
Strand 2
F
103 107parallel
Strand 3
F
57 60parallel
Strand 4
F
159 161parallel
Strand 5
F
188 190parallel
Strand 6
F
177 179anti-parallel
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