Analysis of interatomic Contacts of Structural Units in PDB entry:
3G5N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3G5N entry

There are 4 chains in PDB entry 3G5N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 27HIS 493
B
 GLY 28HIS 492
C
 SER 26HIS 492
D
 GLY 28HIS 492
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 88 helices in PDB entry 3G5N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
42 46Right-handed 310
Helix 2
2
A
50 63Right-handed alpha
Helix 3
3
A
79 89Right-handed alpha
Helix 4
4
A
99 103Right-handed 310
Helix 5
5
A
105 110Right-handed alpha
Helix 6
6
A
112 129Right-handed alpha
Helix 7
7
A
141 160Right-handed alpha
Helix 8
8
A
167 185Right-handed alpha
Helix 9
9
A
192 204Right-handed alpha
Helix 10
10
A
211 222Right-handed alpha
Helix 11
11
A
231 236Right-handed 310
Helix 12
12
A
237 256Right-handed alpha
Helix 13
13
A
263 275Right-handed alpha
Helix 14
14
A
283 317Right-handed alpha
Helix 15
15
A
317 332Right-handed alpha
Helix 16
16
A
339 345Right-handed 310
Helix 17
17
A
346 361Right-handed alpha
Helix 18
18
A
391 397Right-handed alpha
Helix 19
19
A
409 414Right-handed 310
Helix 20
20
A
431 435Right-handed 310
Helix 21
21
A
438 456Right-handed alpha
Helix 22
22
A
464 468Right-handed 310
Helix 23
23
B
42 46Right-handed 310
Helix 24
24
B
50 63Right-handed alpha
Helix 25
25
B
80 89Right-handed alpha
Helix 26
26
B
99 103Right-handed 310
Helix 27
27
B
105 110Right-handed alpha
Helix 28
28
B
112 134Right-handed alpha
Helix 29
29
B
141 160Right-handed alpha
Helix 30
30
B
167 185Right-handed alpha
Helix 31
31
B
192 204Right-handed alpha
Helix 32
32
B
211 222Right-handed alpha
Helix 33
33
B
231 236Right-handed 310
Helix 34
34
B
237 256Right-handed alpha
Helix 35
35
B
263 273Right-handed alpha
Helix 36
36
B
286 317Right-handed alpha
Helix 37
37
B
317 332Right-handed alpha
Helix 38
38
B
339 345Right-handed 310
Helix 39
39
B
346 361Right-handed alpha
Helix 40
40
B
391 397Right-handed alpha
Helix 41
41
B
409 414Right-handed 310
Helix 42
42
B
431 435Right-handed 310
Helix 43
43
B
438 456Right-handed alpha
Helix 44
44
B
464 468Right-handed 310
Helix 45
45
C
42 46Right-handed 310
Helix 46
46
C
50 63Right-handed alpha
Helix 47
47
C
79 89Right-handed alpha
Helix 48
48
C
99 103Right-handed 310
Helix 49
49
C
105 110Right-handed alpha
Helix 50
50
C
112 133Right-handed alpha
Helix 51
51
C
141 161Right-handed alpha
Helix 52
52
C
167 185Right-handed alpha
Helix 53
53
C
192 204Right-handed alpha
Helix 54
54
C
212 222Right-handed alpha
Helix 55
55
C
231 236Right-handed 310
Helix 56
56
C
237 256Right-handed alpha
Helix 57
57
C
263 273Right-handed alpha
Helix 58
58
C
286 317Right-handed alpha
Helix 59
59
C
317 333Right-handed alpha
Helix 60
60
C
339 345Right-handed 310
Helix 61
61
C
346 361Right-handed alpha
Helix 62
62
C
392 397Right-handed alpha
Helix 63
63
C
409 413Right-handed 310
Helix 64
64
C
431 435Right-handed 310
Helix 65
65
C
438 456Right-handed alpha
Helix 66
66
C
464 468Right-handed 310
Helix 67
67
D
42 46Right-handed 310
Helix 68
68
D
50 63Right-handed alpha
Helix 69
69
D
80 89Right-handed alpha
Helix 70
70
D
99 103Right-handed 310
Helix 71
71
D
105 110Right-handed alpha
Helix 72
72
D
112 134Right-handed alpha
Helix 73
73
D
141 160Right-handed alpha
Helix 74
74
D
167 185Right-handed alpha
Helix 75
75
D
192 204Right-handed alpha
Helix 76
76
D
212 222Right-handed alpha
Helix 77
77
D
231 236Right-handed 310
Helix 78
78
D
237 255Right-handed alpha
Helix 79
79
D
263 273Right-handed alpha
Helix 80
80
D
285 317Right-handed alpha
Helix 81
81
D
317 332Right-handed alpha
Helix 82
82
D
339 345Right-handed 310
Helix 83
83
D
346 361Right-handed alpha
Helix 84
84
D
391 397Right-handed alpha
Helix 85
85
D
409 413Right-handed 310
Helix 86
86
D
431 435Right-handed 310
Helix 87
87
D
438 456Right-handed alpha
Helix 88
88
D
464 468Right-handed 310
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There are 14 sheets in PDB entry 3G5N. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 70first strand
Strand 2
A
73 78anti-parallel
Strand 3
A
387 390parallel
Strand 4
A
369 370anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
164 165first strand
Strand 2
A
486 490anti-parallel
Strand 3
A
457 460anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
206 210first strand
Strand 2
B
206 210anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
375 377first strand
Strand 2
A
380 382anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
65 70first strand
Strand 2
B
73 78anti-parallel
Strand 3
B
387 390parallel
Strand 4
B
369 370anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
164 165first strand
Strand 2
B
486 490anti-parallel
Strand 3
B
457 460anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
375 377first strand
Strand 2
B
380 382anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
65 70first strand
Strand 2
C
73 78anti-parallel
Strand 3
C
387 390parallel
Strand 4
C
369 370anti-parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
164 165first strand
Strand 2
C
486 490anti-parallel
Strand 3
C
457 460anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
205 211first strand
Strand 2
D
205 211anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
375 377first strand
Strand 2
C
380 382anti-parallel
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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
65 70first strand
Strand 2
D
73 78anti-parallel
Strand 3
D
387 390parallel
Strand 4
D
369 370anti-parallel
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There are 3 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
164 165first strand
Strand 2
D
486 490anti-parallel
Strand 3
D
457 460anti-parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
375 377first strand
Strand 2
D
380 382anti-parallel
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