Analysis of interatomic Contacts of Structural Units in PDB entry:
3G5T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3G5T entry

There is 1 chain in PDB entry 3G5T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1VAL 299
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 3G5T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1 6Right-handed 310
Helix 2
2
A
10 18Right-handed alpha
Helix 3
3
A
22 33Right-handed alpha
Helix 4
4
A
48 58Right-handed alpha
Helix 5
5
A
70 84Right-handed alpha
Helix 6
6
A
101 105Right-handed 310
Helix 7
7
A
122 126Right-handed 310
Helix 8
8
A
127 138Right-handed alpha
Helix 9
9
A
158 162Right-handed 310
Helix 10
10
A
163 171Right-handed alpha
Helix 11
11
A
175 179Right-handed 310
Helix 12
12
A
182 189Right-handed alpha
Helix 13
13
A
210 215Right-handed 310
Helix 14
14
A
216 223Right-handed alpha
Helix 15
15
A
235 244Right-handed alpha
Helix 16
16
A
246 255Right-handed alpha
Helix 17
17
A
256 259Right-handed 310
Helix 18
18
A
263 276Right-handed alpha
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There are 2 sheets in PDB entry 3G5T. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 95first strand
Strand 2
A
63 68parallel
Strand 3
A
39 43parallel
Strand 4
A
114 120parallel
Strand 5
A
139 154parallel
Strand 6
A
285 298anti-parallel
Strand 7
A
201 209anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 95first strand
Strand 2
A
63 68parallel
Strand 3
A
39 43parallel
Strand 4
A
114 120parallel
Strand 5
A
139 154parallel
Strand 6
A
285 298anti-parallel
Strand 7
A
231 234anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il