Analysis of interatomic Contacts of Structural Units in PDB entry:
3G7V

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3G7V entry

There are 4 chains in PDB entry 3G7V (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 1	SER 399
B	LYS 1	SER 399
C	LYS 1	LEU 397
D	LYS 1	LEU 397

There are 79 helices in PDB entry 3G7V. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	16	32	Right-handed alpha
Helix 2	2	A	42	52	Right-handed alpha
Helix 3	3	A	66	73	Right-handed alpha
Helix 4	4	A	82	87	Right-handed alpha
Helix 5	5	A	90	96	Right-handed alpha
Helix 6	6	A	128	130	Right-handed 310
Helix 7	7	A	131	141	Right-handed alpha
Helix 8	8	A	153	164	Right-handed alpha
Helix 9	9	A	185	201	Right-handed alpha
Helix 10	10	A	209	219	Right-handed alpha
Helix 11	11	A	228	230	Right-handed 310
Helix 12	12	A	231	239	Right-handed alpha
Helix 13	13	A	272	283	Right-handed alpha
Helix 14	14	A	286	297	Right-handed alpha
Helix 15	15	A	304	312	Right-handed alpha
Helix 16	16	A	314	327	Right-handed alpha
Helix 17	17	A	335	352	Right-handed alpha
Helix 18	18	A	356	369	Right-handed alpha
Helix 19	19	A	377	389	Right-handed alpha
Helix 20	20	A	389	398	Right-handed alpha
Helix 21	21	B	16	32	Right-handed alpha
Helix 22	22	B	42	52	Right-handed alpha
Helix 23	23	B	66	73	Right-handed alpha
Helix 24	24	B	82	87	Right-handed alpha
Helix 25	25	B	90	96	Right-handed alpha
Helix 26	26	B	128	130	Right-handed 310
Helix 27	27	B	131	141	Right-handed alpha
Helix 28	28	B	153	164	Right-handed alpha
Helix 29	29	B	185	201	Right-handed alpha
Helix 30	30	B	209	219	Right-handed alpha
Helix 31	31	B	228	230	Right-handed 310
Helix 32	32	B	231	239	Right-handed alpha
Helix 33	33	B	272	283	Right-handed alpha
Helix 34	34	B	286	297	Right-handed alpha
Helix 35	35	B	304	312	Right-handed alpha
Helix 36	36	B	314	327	Right-handed alpha
Helix 37	37	B	335	352	Right-handed alpha
Helix 38	38	B	356	369	Right-handed alpha
Helix 39	39	B	377	387	Right-handed alpha
Helix 40	40	B	389	398	Right-handed alpha
Helix 41	41	C	16	32	Right-handed alpha
Helix 42	42	C	42	52	Right-handed alpha
Helix 43	43	C	66	73	Right-handed alpha
Helix 44	44	C	82	87	Right-handed alpha
Helix 45	45	C	90	96	Right-handed alpha
Helix 46	46	C	128	130	Right-handed 310
Helix 47	47	C	131	141	Right-handed alpha
Helix 48	48	C	153	164	Right-handed alpha
Helix 49	49	C	185	201	Right-handed alpha
Helix 50	50	C	209	219	Right-handed alpha
Helix 51	51	C	228	230	Right-handed 310
Helix 52	52	C	231	239	Right-handed alpha
Helix 53	53	C	272	283	Right-handed alpha
Helix 54	54	C	286	297	Right-handed alpha
Helix 55	55	C	304	312	Right-handed alpha
Helix 56	56	C	314	327	Right-handed alpha
Helix 57	57	C	335	352	Right-handed alpha
Helix 58	58	C	356	369	Right-handed alpha
Helix 59	59	C	377	388	Right-handed alpha
Helix 60	60	C	389	395	Right-handed alpha
Helix 61	61	D	16	32	Right-handed alpha
Helix 62	62	D	42	52	Right-handed alpha
Helix 63	63	D	66	73	Right-handed alpha
Helix 64	64	D	82	87	Right-handed alpha
Helix 65	65	D	90	97	Right-handed alpha
Helix 66	66	D	131	141	Right-handed alpha
Helix 67	67	D	153	164	Right-handed alpha
Helix 68	68	D	185	201	Right-handed alpha
Helix 69	69	D	209	219	Right-handed alpha
Helix 70	70	D	228	230	Right-handed 310
Helix 71	71	D	231	239	Right-handed alpha
Helix 72	72	D	272	283	Right-handed alpha
Helix 73	73	D	286	297	Right-handed alpha
Helix 74	74	D	304	312	Right-handed alpha
Helix 75	75	D	314	327	Right-handed alpha
Helix 76	76	D	335	352	Right-handed alpha
Helix 77	77	D	356	369	Right-handed alpha
Helix 78	78	D	377	388	Right-handed alpha
Helix 79	79	D	389	395	Right-handed alpha

There are 20 sheets in PDB entry 3G7V. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	34	38	first strand
Strand 2	A	6	10	parallel
Strand 3	A	59	63	parallel
Strand 4	A	258	266	anti-parallel
Strand 5	A	106	111	anti-parallel
Strand 6	A	301	302	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	34	38	first strand
Strand 2	A	6	10	parallel
Strand 3	A	59	63	parallel
Strand 4	A	258	266	anti-parallel
Strand 5	A	328	329	parallel

Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	98	99	first strand
Strand 2	A	102	103	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	145	147	first strand
Strand 2	A	222	227	parallel
Strand 3	A	114	118	anti-parallel
Strand 4	A	242	245	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	167	172	first strand
Strand 2	A	175	182	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	35	38	first strand
Strand 2	B	7	10	parallel
Strand 3	B	59	63	parallel
Strand 4	B	258	266	anti-parallel
Strand 5	B	106	111	anti-parallel
Strand 6	B	301	302	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	35	38	first strand
Strand 2	B	7	10	parallel
Strand 3	B	59	63	parallel
Strand 4	B	258	266	anti-parallel
Strand 5	B	328	329	parallel

Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	98	99	first strand
Strand 2	B	102	103	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	145	147	first strand
Strand 2	B	222	227	parallel
Strand 3	B	114	118	anti-parallel
Strand 4	B	242	245	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	167	172	first strand
Strand 2	B	175	182	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	35	38	first strand
Strand 2	C	7	10	parallel
Strand 3	C	59	63	parallel
Strand 4	C	258	266	anti-parallel
Strand 5	C	106	111	anti-parallel
Strand 6	C	301	302	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	35	38	first strand
Strand 2	C	7	10	parallel
Strand 3	C	59	63	parallel
Strand 4	C	258	266	anti-parallel
Strand 5	C	328	329	parallel

Back to list of sheets
Back to top of page

There are 2 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	98	99	first strand
Strand 2	C	102	103	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	145	147	first strand
Strand 2	C	222	227	parallel
Strand 3	C	114	118	anti-parallel
Strand 4	C	242	245	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	167	172	first strand
Strand 2	C	175	182	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	35	38	first strand
Strand 2	D	7	10	parallel
Strand 3	D	59	63	parallel
Strand 4	D	258	266	anti-parallel
Strand 5	D	106	111	anti-parallel
Strand 6	D	301	302	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	35	38	first strand
Strand 2	D	7	10	parallel
Strand 3	D	59	63	parallel
Strand 4	D	258	266	anti-parallel
Strand 5	D	328	329	parallel

Back to list of sheets
Back to top of page

There are 2 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	98	99	first strand
Strand 2	D	102	103	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	145	147	first strand
Strand 2	D	222	227	parallel
Strand 3	D	114	118	anti-parallel
Strand 4	D	242	245	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	167	172	first strand
Strand 2	D	175	182	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3G7V

Analysis of interatomic Contacts of Structural Units in PDB entry:
3G7V