Analysis of interatomic Contacts of Structural Units in PDB entry:
3G9D


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3G9D entry

There are 2 chains in PDB entry 3G9D (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 5LEU 294
B
 HIS 4LEU 294
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 3G9D. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 25Right-handed alpha
Helix 2
2
A
31 39Right-handed alpha
Helix 3
3
A
59 73Right-handed alpha
Helix 4
4
A
79 92Right-handed alpha
Helix 5
5
A
99 113Right-handed alpha
Helix 6
6
A
120 124Right-handed 310
Helix 7
7
A
128 131Right-handed 310
Helix 8
8
A
132 139Right-handed alpha
Helix 9
9
A
142 155Right-handed alpha
Helix 10
10
A
160 179Right-handed alpha
Helix 11
11
A
182 197Right-handed alpha
Helix 12
12
A
198 201Right-handed 310
Helix 13
13
A
212 225Right-handed alpha
Helix 14
14
A
229 239Right-handed alpha
Helix 15
15
A
243 260Right-handed alpha
Helix 16
16
A
261 264Right-handed 310
Helix 17
17
A
265 272Right-handed alpha
Helix 18
18
A
273 289Right-handed alpha
Helix 19
19
B
5 26Right-handed alpha
Helix 20
20
B
31 40Right-handed alpha
Helix 21
21
B
48 52Right-handed 310
Helix 22
22
B
59 75Right-handed alpha
Helix 23
23
B
79 93Right-handed alpha
Helix 24
24
B
99 113Right-handed alpha
Helix 25
25
B
127 131Right-handed 310
Helix 26
26
B
132 139Right-handed alpha
Helix 27
27
B
142 155Right-handed alpha
Helix 28
28
B
160 179Right-handed alpha
Helix 29
29
B
182 197Right-handed alpha
Helix 30
30
B
198 201Right-handed 310
Helix 31
31
B
212 226Right-handed alpha
Helix 32
32
B
229 239Right-handed alpha
Helix 33
33
B
243 260Right-handed alpha
Helix 34
34
B
261 264Right-handed 310
Helix 35
35
B
265 272Right-handed alpha
Helix 36
36
B
273 289Right-handed alpha
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There are no sheets in PDB entry 3G9D
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